Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 RN7SL692P-201ENST00000464677 288 ntBASIC18.01■□□□□ 0.47
CHRNA1P02708 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.01■□□□□ 0.47
CHRNA1P02708 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.01■□□□□ 0.47
CHRNA1P02708 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.01■□□□□ 0.47
CHRNA1P02708 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CHRNA1P02708 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHRNA1P02708 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHRNA1P02708 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHRNA1P02708 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CHRNA1P02708 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHRNA1P02708 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHRNA1P02708 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHRNA1P02708 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHRNA1P02708 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CHRNA1P02708 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CHRNA1P02708 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CHRNA1P02708 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHRNA1P02708 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHRNA1P02708 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18■□□□□ 0.47
CHRNA1P02708 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHRNA1P02708 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CHRNA1P02708 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHRNA1P02708 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18■□□□□ 0.47
CHRNA1P02708 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CHRNA1P02708 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
CHRNA1P02708 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CHRNA1P02708 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHRNA1P02708 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHRNA1P02708 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHRNA1P02708 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHRNA1P02708 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHRNA1P02708 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18■□□□□ 0.47
CHRNA1P02708 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHRNA1P02708 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18■□□□□ 0.47
CHRNA1P02708 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHRNA1P02708 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHRNA1P02708 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18■□□□□ 0.47
CHRNA1P02708 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18■□□□□ 0.47
CHRNA1P02708 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHRNA1P02708 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHRNA1P02708 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18■□□□□ 0.47
CHRNA1P02708 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CHRNA1P02708 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CHRNA1P02708 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18■□□□□ 0.47
CHRNA1P02708 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18■□□□□ 0.47
CHRNA1P02708 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18■□□□□ 0.47
CHRNA1P02708 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18■□□□□ 0.47
CHRNA1P02708 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18■□□□□ 0.47
CHRNA1P02708 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18■□□□□ 0.47
CHRNA1P02708 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHRNA1P02708 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CHRNA1P02708 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHRNA1P02708 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CHRNA1P02708 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHRNA1P02708 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18■□□□□ 0.47
CHRNA1P02708 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18■□□□□ 0.47
CHRNA1P02708 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHRNA1P02708 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHRNA1P02708 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHRNA1P02708 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHRNA1P02708 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.99■□□□□ 0.47
CHRNA1P02708 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.99■□□□□ 0.47
CHRNA1P02708 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.99■□□□□ 0.47
CHRNA1P02708 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHRNA1P02708 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.99■□□□□ 0.47
CHRNA1P02708 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHRNA1P02708 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CHRNA1P02708 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHRNA1P02708 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CHRNA1P02708 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHRNA1P02708 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHRNA1P02708 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
CHRNA1P02708 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHRNA1P02708 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHRNA1P02708 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CHRNA1P02708 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.99■□□□□ 0.47
CHRNA1P02708 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.99■□□□□ 0.47
CHRNA1P02708 COX5BP8-201ENST00000416911 349 ntBASIC17.99■□□□□ 0.47
CHRNA1P02708 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.99■□□□□ 0.47
CHRNA1P02708 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.99■□□□□ 0.47
CHRNA1P02708 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CHRNA1P02708 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.99■□□□□ 0.47
CHRNA1P02708 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CHRNA1P02708 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.99■□□□□ 0.47
CHRNA1P02708 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.99■□□□□ 0.47
CHRNA1P02708 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHRNA1P02708 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHRNA1P02708 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CHRNA1P02708 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHRNA1P02708 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHRNA1P02708 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHRNA1P02708 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHRNA1P02708 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHRNA1P02708 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHRNA1P02708 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHRNA1P02708 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHRNA1P02708 AC020916.1-201ENST00000587762 1774 ntBASIC17.99■□□□□ 0.47
CHRNA1P02708 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CHRNA1P02708 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHRNA1P02708 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms