Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
APOC1P02654 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.83□□□□□ -0.03
APOC1P02654 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
APOC1P02654 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.83□□□□□ -0.03
APOC1P02654 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
APOC1P02654 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
APOC1P02654 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOC1P02654 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOC1P02654 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
APOC1P02654 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOC1P02654 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
APOC1P02654 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOC1P02654 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.83□□□□□ -0.04
APOC1P02654 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.83□□□□□ -0.04
APOC1P02654 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOC1P02654 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOC1P02654 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOC1P02654 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.83□□□□□ -0.04
APOC1P02654 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
APOC1P02654 HLA-J-202ENST00000469281 1241 ntBASIC14.83□□□□□ -0.04
APOC1P02654 BX005266.1-201ENST00000473402 457 ntBASIC14.83□□□□□ -0.04
APOC1P02654 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.83□□□□□ -0.04
APOC1P02654 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
APOC1P02654 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.83□□□□□ -0.04
APOC1P02654 AC091304.2-201ENST00000564639 760 ntBASIC14.83□□□□□ -0.04
APOC1P02654 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.83□□□□□ -0.04
APOC1P02654 NKAPP1-205ENST00000585790 367 ntBASIC14.83□□□□□ -0.04
APOC1P02654 MTDHP3-201ENST00000594186 672 ntBASIC14.83□□□□□ -0.04
APOC1P02654 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.83□□□□□ -0.04
APOC1P02654 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
APOC1P02654 AL355877.3-201ENST00000622820 899 ntBASIC14.83□□□□□ -0.04
APOC1P02654 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.83□□□□□ -0.04
APOC1P02654 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
APOC1P02654 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
APOC1P02654 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOC1P02654 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
APOC1P02654 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOC1P02654 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
APOC1P02654 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
APOC1P02654 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.83□□□□□ -0.04
APOC1P02654 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOC1P02654 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOC1P02654 AC243591.1-201ENST00000452967 1364 ntBASIC14.83□□□□□ -0.04
APOC1P02654 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.83□□□□□ -0.04
APOC1P02654 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
APOC1P02654 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOC1P02654 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
APOC1P02654 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
APOC1P02654 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOC1P02654 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.83□□□□□ -0.04
APOC1P02654 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOC1P02654 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOC1P02654 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOC1P02654 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOC1P02654 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.82□□□□□ -0.04
APOC1P02654 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
APOC1P02654 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOC1P02654 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
APOC1P02654 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
APOC1P02654 AC078925.2-201ENST00000624013 1973 ntBASIC14.82□□□□□ -0.04
APOC1P02654 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
APOC1P02654 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
APOC1P02654 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOC1P02654 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
APOC1P02654 LINC00895-201ENST00000629028 1637 ntBASIC14.82□□□□□ -0.04
APOC1P02654 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.82□□□□□ -0.04
APOC1P02654 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
APOC1P02654 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APOC1P02654 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOC1P02654 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.82□□□□□ -0.04
APOC1P02654 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.82□□□□□ -0.04
APOC1P02654 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
APOC1P02654 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOC1P02654 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOC1P02654 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APOC1P02654 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APOC1P02654 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.82□□□□□ -0.04
APOC1P02654 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.82□□□□□ -0.04
APOC1P02654 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APOC1P02654 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOC1P02654 KRT18P31-201ENST00000506277 1292 ntBASIC14.82□□□□□ -0.04
APOC1P02654 PRELID1P1-202ENST00000567272 903 ntBASIC14.82□□□□□ -0.04
APOC1P02654 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.82□□□□□ -0.04
APOC1P02654 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.82□□□□□ -0.04
APOC1P02654 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.82□□□□□ -0.04
APOC1P02654 AL139424.1-201ENST00000607572 797 ntBASIC14.82□□□□□ -0.04
APOC1P02654 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.82□□□□□ -0.04
APOC1P02654 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.82□□□□□ -0.04
APOC1P02654 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.82□□□□□ -0.04
APOC1P02654 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.82□□□□□ -0.04
APOC1P02654 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.82□□□□□ -0.04
APOC1P02654 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOC1P02654 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.82□□□□□ -0.04
APOC1P02654 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.82□□□□□ -0.04
APOC1P02654 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
APOC1P02654 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOC1P02654 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOC1P02654 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOC1P02654 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
APOC1P02654 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms