Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 AL596275.1-201ENST00000423464 877 ntBASIC14.44□□□□□ -0.1
HLA-DQB1P01920 BX664615.1-201ENST00000443558 458 ntBASIC14.44□□□□□ -0.1
HLA-DQB1P01920 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 AL390719.2-201ENST00000606993 987 ntBASIC14.44□□□□□ -0.1
HLA-DQB1P01920 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 AC020658.6-201ENST00000623564 1870 ntBASIC14.44□□□□□ -0.1
HLA-DQB1P01920 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-DQB1P01920 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQB1P01920 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQB1P01920 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQB1P01920 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQB1P01920 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQB1P01920 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-DQB1P01920 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
HLA-DQB1P01920 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DQB1P01920 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HLA-DQB1P01920 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQB1P01920 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
HLA-DQB1P01920 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.43□□□□□ -0.1
HLA-DQB1P01920 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.43□□□□□ -0.1
HLA-DQB1P01920 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HLA-DQB1P01920 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
HLA-DQB1P01920 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.43□□□□□ -0.1
HLA-DQB1P01920 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQB1P01920 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.43□□□□□ -0.1
HLA-DQB1P01920 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.43□□□□□ -0.1
HLA-DQB1P01920 AC013467.2-201ENST00000605472 835 ntBASIC14.43□□□□□ -0.1
HLA-DQB1P01920 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQB1P01920 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQB1P01920 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQB1P01920 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQB1P01920 AL021920.2-201ENST00000624828 1351 ntBASIC14.43□□□□□ -0.1
HLA-DQB1P01920 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQB1P01920 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
HLA-DQB1P01920 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HLA-DQB1P01920 AC132938.5-201ENST00000624980 1813 ntBASIC14.43□□□□□ -0.1
HLA-DQB1P01920 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQB1P01920 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DQB1P01920 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DQB1P01920 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 AC136621.1-201ENST00000624017 2304 ntBASIC14.42□□□□□ -0.1
HLA-DQB1P01920 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms