Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.34■□□□□ 0.53
CD4P01730 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.34■□□□□ 0.53
CD4P01730 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.34■□□□□ 0.53
CD4P01730 AC140912.1-201ENST00000577171 1054 ntBASIC18.34■□□□□ 0.53
CD4P01730 RN7SL828P-201ENST00000607615 303 ntBASIC18.34■□□□□ 0.53
CD4P01730 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CD4P01730 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CD4P01730 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CD4P01730 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.34■□□□□ 0.53
CD4P01730 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD4P01730 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD4P01730 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD4P01730 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CD4P01730 CETN4P-206ENST00000642099 2168 ntBASIC18.34■□□□□ 0.53
CD4P01730 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
CD4P01730 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.33■□□□□ 0.53
CD4P01730 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CD4P01730 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CD4P01730 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.33■□□□□ 0.53
CD4P01730 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CD4P01730 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
CD4P01730 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CD4P01730 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CD4P01730 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CD4P01730 LINC02012-201ENST00000608206 1725 ntBASIC18.33■□□□□ 0.52
CD4P01730 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.33■□□□□ 0.52
CD4P01730 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CD4P01730 AC098614.1-201ENST00000368528 745 ntBASIC18.33■□□□□ 0.52
CD4P01730 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CD4P01730 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.33■□□□□ 0.52
CD4P01730 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CD4P01730 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.33■□□□□ 0.52
CD4P01730 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.33■□□□□ 0.52
CD4P01730 AL353705.2-201ENST00000428243 662 ntBASIC18.33■□□□□ 0.52
CD4P01730 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CD4P01730 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.33■□□□□ 0.52
CD4P01730 GPR53P-205ENST00000457298 1084 ntBASIC18.33■□□□□ 0.52
CD4P01730 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.33■□□□□ 0.52
CD4P01730 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.33■□□□□ 0.52
CD4P01730 IGHV3-71-201ENST00000523324 359 ntBASIC18.33■□□□□ 0.52
CD4P01730 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.33■□□□□ 0.52
CD4P01730 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.33■□□□□ 0.52
CD4P01730 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.33■□□□□ 0.52
CD4P01730 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.33■□□□□ 0.52
CD4P01730 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.33■□□□□ 0.52
CD4P01730 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.33■□□□□ 0.52
CD4P01730 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.33■□□□□ 0.52
CD4P01730 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.33■□□□□ 0.52
CD4P01730 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.33■□□□□ 0.52
CD4P01730 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CD4P01730 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CD4P01730 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CD4P01730 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CD4P01730 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CD4P01730 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.33■□□□□ 0.52
CD4P01730 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CD4P01730 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.33■□□□□ 0.52
CD4P01730 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CD4P01730 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CD4P01730 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.32■□□□□ 0.52
CD4P01730 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD4P01730 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.32■□□□□ 0.52
CD4P01730 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD4P01730 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD4P01730 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD4P01730 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD4P01730 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD4P01730 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD4P01730 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CD4P01730 AL023806.1-201ENST00000603994 1649 ntBASIC18.32■□□□□ 0.52
CD4P01730 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.32■□□□□ 0.52
CD4P01730 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD4P01730 BANF1P1-201ENST00000553684 263 ntBASIC18.32■□□□□ 0.52
CD4P01730 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CD4P01730 AL589739.1-201ENST00000607720 493 ntBASIC18.32■□□□□ 0.52
CD4P01730 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CD4P01730 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.32■□□□□ 0.52
CD4P01730 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CD4P01730 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
CD4P01730 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.32■□□□□ 0.52
CD4P01730 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD4P01730 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CD4P01730 FRMD8P1-201ENST00000440433 1524 ntBASIC18.32■□□□□ 0.52
CD4P01730 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CD4P01730 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD4P01730 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CD4P01730 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD4P01730 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD4P01730 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CD4P01730 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD4P01730 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD4P01730 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD4P01730 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CD4P01730 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD4P01730 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD4P01730 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CD4P01730 AL021920.2-201ENST00000624828 1351 ntBASIC18.31■□□□□ 0.52
CD4P01730 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD4P01730 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD4P01730 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms