Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.23■□□□□ 0.03
CLPXO76031 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.23■□□□□ 0.03
CLPXO76031 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.23■□□□□ 0.03
CLPXO76031 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.23■□□□□ 0.03
CLPXO76031 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.23■□□□□ 0.03
CLPXO76031 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CLPXO76031 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.23■□□□□ 0.03
CLPXO76031 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLPXO76031 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLPXO76031 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLPXO76031 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLPXO76031 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
CLPXO76031 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLPXO76031 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLPXO76031 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLPXO76031 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.23■□□□□ 0.03
CLPXO76031 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.23■□□□□ 0.03
CLPXO76031 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CLPXO76031 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLPXO76031 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLPXO76031 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.23■□□□□ 0.03
CLPXO76031 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.23■□□□□ 0.03
CLPXO76031 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLPXO76031 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.22■□□□□ 0.03
CLPXO76031 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CLPXO76031 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLPXO76031 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLPXO76031 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLPXO76031 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLPXO76031 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLPXO76031 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLPXO76031 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CLPXO76031 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLPXO76031 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLPXO76031 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.22■□□□□ 0.03
CLPXO76031 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLPXO76031 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.22■□□□□ 0.03
CLPXO76031 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CLPXO76031 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLPXO76031 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLPXO76031 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CLPXO76031 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.22■□□□□ 0.03
CLPXO76031 RNF152P1-201ENST00000397754 604 ntBASIC15.22■□□□□ 0.03
CLPXO76031 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLPXO76031 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.22■□□□□ 0.03
CLPXO76031 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.22■□□□□ 0.03
CLPXO76031 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
CLPXO76031 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.22■□□□□ 0.03
CLPXO76031 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CLPXO76031 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CLPXO76031 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
CLPXO76031 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLPXO76031 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLPXO76031 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.22■□□□□ 0.03
CLPXO76031 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLPXO76031 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLPXO76031 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CLPXO76031 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLPXO76031 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.22■□□□□ 0.03
CLPXO76031 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLPXO76031 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLPXO76031 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLPXO76031 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLPXO76031 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.22■□□□□ 0.03
CLPXO76031 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLPXO76031 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLPXO76031 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLPXO76031 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.22■□□□□ 0.03
CLPXO76031 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.22■□□□□ 0.03
CLPXO76031 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.22■□□□□ 0.03
CLPXO76031 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CLPXO76031 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLPXO76031 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLPXO76031 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
CLPXO76031 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.21■□□□□ 0.03
CLPXO76031 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLPXO76031 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
CLPXO76031 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLPXO76031 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.21■□□□□ 0.03
CLPXO76031 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
CLPXO76031 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLPXO76031 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CLPXO76031 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLPXO76031 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CLPXO76031 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLPXO76031 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLPXO76031 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.21■□□□□ 0.03
CLPXO76031 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.21■□□□□ 0.03
CLPXO76031 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.21■□□□□ 0.03
CLPXO76031 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CLPXO76031 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLPXO76031 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLPXO76031 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.21■□□□□ 0.03
CLPXO76031 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.21■□□□□ 0.03
CLPXO76031 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.21■□□□□ 0.03
CLPXO76031 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.21■□□□□ 0.03
CLPXO76031 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLPXO76031 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLPXO76031 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLPXO76031 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms