Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.48■□□□□ 0.39
OPHN1O60890 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.48■□□□□ 0.39
OPHN1O60890 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
OPHN1O60890 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.48■□□□□ 0.39
OPHN1O60890 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
OPHN1O60890 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
OPHN1O60890 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
OPHN1O60890 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
OPHN1O60890 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
OPHN1O60890 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
OPHN1O60890 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
OPHN1O60890 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
OPHN1O60890 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
OPHN1O60890 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
OPHN1O60890 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
OPHN1O60890 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
OPHN1O60890 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
OPHN1O60890 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
OPHN1O60890 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
OPHN1O60890 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
OPHN1O60890 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
OPHN1O60890 FLJ38576-201ENST00000623820 2459 ntBASIC17.47■□□□□ 0.39
OPHN1O60890 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
OPHN1O60890 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
OPHN1O60890 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
OPHN1O60890 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
OPHN1O60890 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
OPHN1O60890 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
OPHN1O60890 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
OPHN1O60890 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
OPHN1O60890 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
OPHN1O60890 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.47■□□□□ 0.39
OPHN1O60890 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
OPHN1O60890 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
OPHN1O60890 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
OPHN1O60890 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.47■□□□□ 0.39
OPHN1O60890 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
OPHN1O60890 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.47■□□□□ 0.39
OPHN1O60890 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.47■□□□□ 0.39
OPHN1O60890 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.47■□□□□ 0.39
OPHN1O60890 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.47■□□□□ 0.39
OPHN1O60890 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
OPHN1O60890 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
OPHN1O60890 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
OPHN1O60890 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.47■□□□□ 0.39
OPHN1O60890 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
OPHN1O60890 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
OPHN1O60890 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
OPHN1O60890 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
OPHN1O60890 AC078925.2-201ENST00000624013 1973 ntBASIC17.47■□□□□ 0.39
OPHN1O60890 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
OPHN1O60890 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
OPHN1O60890 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
OPHN1O60890 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
OPHN1O60890 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
OPHN1O60890 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
OPHN1O60890 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
OPHN1O60890 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.47■□□□□ 0.39
OPHN1O60890 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
OPHN1O60890 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
OPHN1O60890 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.46■□□□□ 0.39
OPHN1O60890 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
OPHN1O60890 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
OPHN1O60890 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.46■□□□□ 0.39
OPHN1O60890 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
OPHN1O60890 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.46■□□□□ 0.39
OPHN1O60890 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.46■□□□□ 0.39
OPHN1O60890 CYMP-203ENST00000474680 1263 ntBASIC17.46■□□□□ 0.39
OPHN1O60890 AP002490.2-201ENST00000524791 560 ntBASIC17.46■□□□□ 0.39
OPHN1O60890 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.46■□□□□ 0.39
OPHN1O60890 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.46■□□□□ 0.39
OPHN1O60890 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.46■□□□□ 0.39
OPHN1O60890 AL353135.1-201ENST00000606729 504 ntBASIC17.46■□□□□ 0.39
OPHN1O60890 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.46■□□□□ 0.39
OPHN1O60890 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
OPHN1O60890 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
OPHN1O60890 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.46■□□□□ 0.39
OPHN1O60890 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.46■□□□□ 0.39
OPHN1O60890 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
OPHN1O60890 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.46■□□□□ 0.39
OPHN1O60890 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
OPHN1O60890 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
OPHN1O60890 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
OPHN1O60890 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
OPHN1O60890 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
OPHN1O60890 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
OPHN1O60890 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
OPHN1O60890 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
OPHN1O60890 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.46■□□□□ 0.39
OPHN1O60890 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.46■□□□□ 0.39
OPHN1O60890 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.46■□□□□ 0.39
OPHN1O60890 NCF1C-201ENST00000438382 1427 ntBASIC17.46■□□□□ 0.39
OPHN1O60890 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.46■□□□□ 0.39
OPHN1O60890 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.46■□□□□ 0.38
OPHN1O60890 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
OPHN1O60890 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.38
OPHN1O60890 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
OPHN1O60890 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.38
OPHN1O60890 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
OPHN1O60890 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.46■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms