Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 AC004449.1-201ENST00000564240 433 ntBASIC17.19■□□□□ 0.34
TSPAN3O60637 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.19■□□□□ 0.34
TSPAN3O60637 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.19■□□□□ 0.34
TSPAN3O60637 AC093028.1-201ENST00000622998 982 ntBASIC17.19■□□□□ 0.34
TSPAN3O60637 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.19■□□□□ 0.34
TSPAN3O60637 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TSPAN3O60637 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TSPAN3O60637 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TSPAN3O60637 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TSPAN3O60637 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.19■□□□□ 0.34
TSPAN3O60637 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TSPAN3O60637 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TSPAN3O60637 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TSPAN3O60637 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TSPAN3O60637 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TSPAN3O60637 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TSPAN3O60637 LINC00895-201ENST00000629028 1637 ntBASIC17.18■□□□□ 0.34
TSPAN3O60637 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TSPAN3O60637 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TSPAN3O60637 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TSPAN3O60637 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TSPAN3O60637 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TSPAN3O60637 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TSPAN3O60637 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.18■□□□□ 0.34
TSPAN3O60637 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TSPAN3O60637 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.18■□□□□ 0.34
TSPAN3O60637 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TSPAN3O60637 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TSPAN3O60637 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.18■□□□□ 0.34
TSPAN3O60637 AL627223.1-201ENST00000416693 442 ntBASIC17.18■□□□□ 0.34
TSPAN3O60637 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.18■□□□□ 0.34
TSPAN3O60637 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.18■□□□□ 0.34
TSPAN3O60637 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.18■□□□□ 0.34
TSPAN3O60637 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.18■□□□□ 0.34
TSPAN3O60637 AC013467.2-201ENST00000605472 835 ntBASIC17.18■□□□□ 0.34
TSPAN3O60637 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.18■□□□□ 0.34
TSPAN3O60637 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.18■□□□□ 0.34
TSPAN3O60637 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TSPAN3O60637 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
TSPAN3O60637 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TSPAN3O60637 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TSPAN3O60637 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TSPAN3O60637 AC079328.2-201ENST00000561241 3354 ntBASIC17.17■□□□□ 0.34
TSPAN3O60637 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TSPAN3O60637 UXT-AS1-201ENST00000590504 1525 ntBASIC17.17■□□□□ 0.34
TSPAN3O60637 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.17■□□□□ 0.34
TSPAN3O60637 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
TSPAN3O60637 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TSPAN3O60637 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
TSPAN3O60637 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
TSPAN3O60637 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TSPAN3O60637 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TSPAN3O60637 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TSPAN3O60637 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.17■□□□□ 0.34
TSPAN3O60637 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TSPAN3O60637 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TSPAN3O60637 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
TSPAN3O60637 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
TSPAN3O60637 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.17■□□□□ 0.34
TSPAN3O60637 FAM58DP-201ENST00000428076 619 ntBASIC17.17■□□□□ 0.34
TSPAN3O60637 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.17■□□□□ 0.34
TSPAN3O60637 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.17■□□□□ 0.34
TSPAN3O60637 AC023141.5-201ENST00000458585 616 ntBASIC17.17■□□□□ 0.34
TSPAN3O60637 AC069335.1-201ENST00000489972 472 ntBASIC17.17■□□□□ 0.34
TSPAN3O60637 IGHV3-62-201ENST00000520057 340 ntBASIC17.17■□□□□ 0.34
TSPAN3O60637 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TSPAN3O60637 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.17■□□□□ 0.34
TSPAN3O60637 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.17■□□□□ 0.34
TSPAN3O60637 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TSPAN3O60637 MIR3909-201ENST00000579518 119 ntBASIC17.17■□□□□ 0.34
TSPAN3O60637 AC021097.1-201ENST00000607902 574 ntBASIC17.17■□□□□ 0.34
TSPAN3O60637 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TSPAN3O60637 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TSPAN3O60637 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.17■□□□□ 0.34
TSPAN3O60637 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TSPAN3O60637 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TSPAN3O60637 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TSPAN3O60637 SNX33P1-201ENST00000592116 1762 ntBASIC17.17■□□□□ 0.34
TSPAN3O60637 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TSPAN3O60637 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TSPAN3O60637 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TSPAN3O60637 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TSPAN3O60637 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TSPAN3O60637 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.17■□□□□ 0.34
TSPAN3O60637 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TSPAN3O60637 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN3O60637 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TSPAN3O60637 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN3O60637 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN3O60637 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TSPAN3O60637 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN3O60637 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN3O60637 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN3O60637 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN3O60637 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TSPAN3O60637 PCDHA12-202ENST00000613593 2588 ntBASIC17.16■□□□□ 0.34
TSPAN3O60637 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN3O60637 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN3O60637 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN3O60637 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms