Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CUBNO60494 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CUBNO60494 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CUBNO60494 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
CUBNO60494 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CUBNO60494 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CUBNO60494 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
CUBNO60494 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CUBNO60494 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.17□□□□□ -0.3
CUBNO60494 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.17□□□□□ -0.3
CUBNO60494 AC133552.6-201ENST00000613406 534 ntBASIC13.17□□□□□ -0.3
CUBNO60494 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.17□□□□□ -0.3
CUBNO60494 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CUBNO60494 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.17□□□□□ -0.3
CUBNO60494 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC13.17□□□□□ -0.3
CUBNO60494 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CUBNO60494 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CUBNO60494 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CUBNO60494 AC005229.1-201ENST00000392885 409 ntBASIC13.17□□□□□ -0.3
CUBNO60494 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CUBNO60494 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.17□□□□□ -0.3
CUBNO60494 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CUBNO60494 AC103810.3-201ENST00000583567 96 ntBASIC13.17□□□□□ -0.3
CUBNO60494 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CUBNO60494 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CUBNO60494 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CUBNO60494 AC093525.9-201ENST00000624961 1746 ntBASIC13.17□□□□□ -0.3
CUBNO60494 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CUBNO60494 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CUBNO60494 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CUBNO60494 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
CUBNO60494 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CUBNO60494 KRT18P55-202ENST00000578578 1546 ntBASIC13.17□□□□□ -0.3
CUBNO60494 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CUBNO60494 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CUBNO60494 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
CUBNO60494 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CUBNO60494 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.17□□□□□ -0.3
CUBNO60494 MIR1247-201ENST00000408206 136 ntBASIC13.17□□□□□ -0.3
CUBNO60494 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.17□□□□□ -0.3
CUBNO60494 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CUBNO60494 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
CUBNO60494 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.17□□□□□ -0.3
CUBNO60494 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.17□□□□□ -0.3
CUBNO60494 AL391069.4-201ENST00000609583 481 ntBASIC13.17□□□□□ -0.3
CUBNO60494 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.17□□□□□ -0.3
CUBNO60494 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CUBNO60494 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CUBNO60494 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CUBNO60494 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CUBNO60494 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CUBNO60494 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.16□□□□□ -0.3
CUBNO60494 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.16□□□□□ -0.3
CUBNO60494 AL353705.2-201ENST00000428243 662 ntBASIC13.16□□□□□ -0.3
CUBNO60494 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.16□□□□□ -0.3
CUBNO60494 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.16□□□□□ -0.3
CUBNO60494 FRMD8P1-201ENST00000440433 1524 ntBASIC13.16□□□□□ -0.3
CUBNO60494 PCDH8P1-201ENST00000428983 2773 ntBASIC13.16□□□□□ -0.3
CUBNO60494 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CUBNO60494 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CUBNO60494 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CUBNO60494 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CUBNO60494 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CUBNO60494 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CUBNO60494 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CUBNO60494 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.16□□□□□ -0.3
CUBNO60494 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC13.16□□□□□ -0.3
CUBNO60494 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CUBNO60494 CYP2A7P1-201ENST00000595391 815 ntBASIC13.16□□□□□ -0.3
CUBNO60494 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC13.16□□□□□ -0.3
CUBNO60494 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC13.16□□□□□ -0.3
CUBNO60494 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC13.16□□□□□ -0.3
CUBNO60494 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CUBNO60494 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.16□□□□□ -0.3
CUBNO60494 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CUBNO60494 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CUBNO60494 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CUBNO60494 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CUBNO60494 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CUBNO60494 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CUBNO60494 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CUBNO60494 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CUBNO60494 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CUBNO60494 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.15□□□□□ -0.3
CUBNO60494 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.15□□□□□ -0.3
CUBNO60494 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CUBNO60494 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.15□□□□□ -0.3
CUBNO60494 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CUBNO60494 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CUBNO60494 AC108860.2-201ENST00000562760 2183 ntBASIC13.15□□□□□ -0.3
CUBNO60494 AC092337.1-201ENST00000568699 1129 ntBASIC13.15□□□□□ -0.3
CUBNO60494 AL139327.4-201ENST00000612362 153 ntBASIC13.15□□□□□ -0.3
CUBNO60494 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC13.15□□□□□ -0.3
CUBNO60494 COMP-202ENST00000425807 2292 ntTSL 2 BASIC13.15□□□□□ -0.3
CUBNO60494 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CUBNO60494 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.15□□□□□ -0.3
CUBNO60494 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CUBNO60494 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CUBNO60494 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CUBNO60494 HLA-H-201ENST00000383620 1096 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms