Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC12.99□□□□□ -0.33
PDE6DO43924 ECEL1P2-202ENST00000465689 757 ntBASIC12.99□□□□□ -0.33
PDE6DO43924 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PDE6DO43924 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC12.99□□□□□ -0.33
PDE6DO43924 AC034232.1-201ENST00000506026 1064 ntBASIC12.99□□□□□ -0.33
PDE6DO43924 RPPH1-201ENST00000516869 333 ntBASIC12.99□□□□□ -0.33
PDE6DO43924 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC12.99□□□□□ -0.33
PDE6DO43924 STK25P1-201ENST00000585406 838 ntBASIC12.99□□□□□ -0.33
PDE6DO43924 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC12.99□□□□□ -0.33
PDE6DO43924 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PDE6DO43924 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.99□□□□□ -0.33
PDE6DO43924 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PDE6DO43924 AP002414.2-201ENST00000591780 3365 ntBASIC12.99□□□□□ -0.33
PDE6DO43924 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
PDE6DO43924 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PDE6DO43924 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PDE6DO43924 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
PDE6DO43924 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PDE6DO43924 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PDE6DO43924 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
PDE6DO43924 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PDE6DO43924 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PDE6DO43924 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6DO43924 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
PDE6DO43924 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6DO43924 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC12.98□□□□□ -0.33
PDE6DO43924 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC12.98□□□□□ -0.33
PDE6DO43924 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6DO43924 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
PDE6DO43924 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6DO43924 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
PDE6DO43924 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.98□□□□□ -0.33
PDE6DO43924 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6DO43924 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.98□□□□□ -0.33
PDE6DO43924 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6DO43924 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6DO43924 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6DO43924 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6DO43924 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC12.98□□□□□ -0.33
PDE6DO43924 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.98□□□□□ -0.33
PDE6DO43924 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
PDE6DO43924 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6DO43924 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC12.98□□□□□ -0.33
PDE6DO43924 AC103564.2-201ENST00000432853 1299 ntBASIC12.98□□□□□ -0.33
PDE6DO43924 AC068472.1-201ENST00000474589 881 ntBASIC12.98□□□□□ -0.33
PDE6DO43924 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6DO43924 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6DO43924 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC12.98□□□□□ -0.33
PDE6DO43924 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC12.98□□□□□ -0.33
PDE6DO43924 NT5C-210ENST00000582160 860 ntTSL 2 BASIC12.98□□□□□ -0.33
PDE6DO43924 AC104771.1-201ENST00000603335 964 ntBASIC12.98□□□□□ -0.33
PDE6DO43924 AC006058.3-201ENST00000606217 1069 ntBASIC12.98□□□□□ -0.33
PDE6DO43924 VPS72-207ENST00000640458 689 ntTSL 5 BASIC12.98□□□□□ -0.33
PDE6DO43924 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6DO43924 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6DO43924 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.98□□□□□ -0.33
PDE6DO43924 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6DO43924 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.98□□□□□ -0.33
PDE6DO43924 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6DO43924 LINC02447-202ENST00000501888 2146 ntBASIC12.98□□□□□ -0.33
PDE6DO43924 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6DO43924 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6DO43924 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6DO43924 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6DO43924 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6DO43924 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6DO43924 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
PDE6DO43924 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PDE6DO43924 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC12.98□□□□□ -0.33
PDE6DO43924 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
PDE6DO43924 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PDE6DO43924 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC12.97□□□□□ -0.33
PDE6DO43924 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
PDE6DO43924 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PDE6DO43924 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PDE6DO43924 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC12.97□□□□□ -0.33
PDE6DO43924 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PDE6DO43924 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
PDE6DO43924 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC12.97□□□□□ -0.33
PDE6DO43924 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
PDE6DO43924 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC12.97□□□□□ -0.33
PDE6DO43924 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PDE6DO43924 CDC14C-201ENST00000428251 1719 ntBASIC12.97□□□□□ -0.33
PDE6DO43924 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
PDE6DO43924 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PDE6DO43924 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC12.97□□□□□ -0.33
PDE6DO43924 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC12.97□□□□□ -0.33
PDE6DO43924 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.97□□□□□ -0.33
PDE6DO43924 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PDE6DO43924 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC12.97□□□□□ -0.33
PDE6DO43924 RPS2P55-201ENST00000397318 883 ntBASIC12.97□□□□□ -0.33
PDE6DO43924 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PDE6DO43924 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC12.97□□□□□ -0.33
PDE6DO43924 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC12.97□□□□□ -0.33
PDE6DO43924 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC12.97□□□□□ -0.33
PDE6DO43924 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC12.97□□□□□ -0.33
PDE6DO43924 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PDE6DO43924 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC12.97□□□□□ -0.33
PDE6DO43924 AP001412.1-201ENST00000608405 714 ntBASIC12.97□□□□□ -0.33
PDE6DO43924 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms