Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
ITM2AO43736 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.41■□□□□ 0.22
ITM2AO43736 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ITM2AO43736 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ITM2AO43736 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.41■□□□□ 0.22
ITM2AO43736 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.41■□□□□ 0.22
ITM2AO43736 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
ITM2AO43736 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ITM2AO43736 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ITM2AO43736 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.41■□□□□ 0.22
ITM2AO43736 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ITM2AO43736 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ITM2AO43736 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ITM2AO43736 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.41■□□□□ 0.22
ITM2AO43736 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.41■□□□□ 0.22
ITM2AO43736 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ITM2AO43736 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ITM2AO43736 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ITM2AO43736 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ITM2AO43736 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.4■□□□□ 0.22
ITM2AO43736 TOP3BP1-201ENST00000420768 1380 ntBASIC16.4■□□□□ 0.22
ITM2AO43736 AC002310.6-201ENST00000624451 1377 ntBASIC16.4■□□□□ 0.22
ITM2AO43736 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ITM2AO43736 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
ITM2AO43736 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ITM2AO43736 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
ITM2AO43736 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ITM2AO43736 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ITM2AO43736 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ITM2AO43736 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.4■□□□□ 0.22
ITM2AO43736 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.4■□□□□ 0.22
ITM2AO43736 RCN1P1-201ENST00000400413 996 ntBASIC16.4■□□□□ 0.22
ITM2AO43736 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ITM2AO43736 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ITM2AO43736 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.4■□□□□ 0.22
ITM2AO43736 ABCD1P5-201ENST00000445663 754 ntBASIC16.4■□□□□ 0.22
ITM2AO43736 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ITM2AO43736 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ITM2AO43736 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
ITM2AO43736 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.4■□□□□ 0.22
ITM2AO43736 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.4■□□□□ 0.22
ITM2AO43736 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.4■□□□□ 0.22
ITM2AO43736 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.4■□□□□ 0.22
ITM2AO43736 LINC01023-201ENST00000606054 436 ntBASIC16.4■□□□□ 0.22
ITM2AO43736 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ITM2AO43736 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
ITM2AO43736 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ITM2AO43736 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ITM2AO43736 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ITM2AO43736 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.4■□□□□ 0.22
ITM2AO43736 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ITM2AO43736 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ITM2AO43736 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.4■□□□□ 0.22
ITM2AO43736 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ITM2AO43736 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ITM2AO43736 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ITM2AO43736 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ITM2AO43736 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ITM2AO43736 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
ITM2AO43736 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
ITM2AO43736 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.39■□□□□ 0.21
ITM2AO43736 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ITM2AO43736 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.39■□□□□ 0.21
ITM2AO43736 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
ITM2AO43736 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.39■□□□□ 0.21
ITM2AO43736 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ITM2AO43736 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
ITM2AO43736 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ITM2AO43736 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ITM2AO43736 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ITM2AO43736 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
ITM2AO43736 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ITM2AO43736 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ITM2AO43736 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ITM2AO43736 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ITM2AO43736 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.39■□□□□ 0.21
ITM2AO43736 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.39■□□□□ 0.21
ITM2AO43736 MIR4492-201ENST00000581627 80 ntBASIC16.39■□□□□ 0.21
ITM2AO43736 AP002414.4-201ENST00000589764 1148 ntBASIC16.39■□□□□ 0.21
ITM2AO43736 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.39■□□□□ 0.21
ITM2AO43736 AC064862.7-201ENST00000604520 867 ntBASIC16.39■□□□□ 0.21
ITM2AO43736 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ITM2AO43736 AL121956.5-201ENST00000625261 221 ntBASIC16.39■□□□□ 0.21
ITM2AO43736 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ITM2AO43736 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.39■□□□□ 0.21
ITM2AO43736 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.39■□□□□ 0.21
ITM2AO43736 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.39■□□□□ 0.21
ITM2AO43736 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ITM2AO43736 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.39■□□□□ 0.21
ITM2AO43736 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
ITM2AO43736 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ITM2AO43736 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ITM2AO43736 AP005117.1-202ENST00000581724 1908 ntBASIC16.39■□□□□ 0.21
ITM2AO43736 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
ITM2AO43736 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ITM2AO43736 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ITM2AO43736 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ITM2AO43736 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ITM2AO43736 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ITM2AO43736 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms