Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 FAM215A-202ENST00000632077 792 ntBASIC18.72■□□□□ 0.59
ACTN4O43707 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ACTN4O43707 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.72■□□□□ 0.59
ACTN4O43707 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ACTN4O43707 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ACTN4O43707 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ACTN4O43707 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ACTN4O43707 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.72■□□□□ 0.59
ACTN4O43707 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.72■□□□□ 0.59
ACTN4O43707 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ACTN4O43707 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ACTN4O43707 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ACTN4O43707 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ACTN4O43707 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.72■□□□□ 0.59
ACTN4O43707 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ACTN4O43707 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ACTN4O43707 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ACTN4O43707 AL596087.1-201ENST00000400979 1969 ntBASIC18.72■□□□□ 0.59
ACTN4O43707 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ACTN4O43707 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ACTN4O43707 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.71■□□□□ 0.59
ACTN4O43707 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ACTN4O43707 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ACTN4O43707 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ACTN4O43707 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ACTN4O43707 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ACTN4O43707 AC007950.2-201ENST00000615045 2347 ntBASIC18.71■□□□□ 0.59
ACTN4O43707 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
ACTN4O43707 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.71■□□□□ 0.59
ACTN4O43707 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ACTN4O43707 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ACTN4O43707 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.71■□□□□ 0.59
ACTN4O43707 AC022188.1-201ENST00000620960 1664 ntBASIC18.71■□□□□ 0.59
ACTN4O43707 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ACTN4O43707 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.71■□□□□ 0.59
ACTN4O43707 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ACTN4O43707 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
ACTN4O43707 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ACTN4O43707 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.71■□□□□ 0.59
ACTN4O43707 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ACTN4O43707 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ACTN4O43707 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
ACTN4O43707 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.71■□□□□ 0.59
ACTN4O43707 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.71■□□□□ 0.59
ACTN4O43707 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.71■□□□□ 0.59
ACTN4O43707 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.71■□□□□ 0.59
ACTN4O43707 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.71■□□□□ 0.59
ACTN4O43707 ACTL9-202ENST00000612068 1252 ntBASIC18.71■□□□□ 0.59
ACTN4O43707 MIR1199-201ENST00000621445 119 ntBASIC18.71■□□□□ 0.59
ACTN4O43707 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ACTN4O43707 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ACTN4O43707 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ACTN4O43707 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.71■□□□□ 0.59
ACTN4O43707 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ACTN4O43707 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ACTN4O43707 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
ACTN4O43707 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
ACTN4O43707 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ACTN4O43707 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.71■□□□□ 0.59
ACTN4O43707 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ACTN4O43707 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ACTN4O43707 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
ACTN4O43707 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
ACTN4O43707 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.7■□□□□ 0.58
ACTN4O43707 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
ACTN4O43707 CROCCP1-201ENST00000426910 5675 ntBASIC18.7■□□□□ 0.58
ACTN4O43707 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.7■□□□□ 0.58
ACTN4O43707 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ACTN4O43707 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ACTN4O43707 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
ACTN4O43707 CICP6-201ENST00000457191 2729 ntBASIC18.7■□□□□ 0.58
ACTN4O43707 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ACTN4O43707 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ACTN4O43707 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ACTN4O43707 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.7■□□□□ 0.58
ACTN4O43707 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ACTN4O43707 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ACTN4O43707 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.7■□□□□ 0.58
ACTN4O43707 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ACTN4O43707 HCG4-201ENST00000418983 998 ntBASIC18.7■□□□□ 0.58
ACTN4O43707 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ACTN4O43707 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ACTN4O43707 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.7■□□□□ 0.58
ACTN4O43707 PCGF3-213ENST00000620529 1899 ntBASIC18.7■□□□□ 0.58
ACTN4O43707 AC004790.2-201ENST00000623588 572 ntBASIC18.7■□□□□ 0.58
ACTN4O43707 AC117500.6-201ENST00000624871 588 ntBASIC18.7■□□□□ 0.58
ACTN4O43707 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ACTN4O43707 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ACTN4O43707 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ACTN4O43707 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.7■□□□□ 0.58
ACTN4O43707 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
ACTN4O43707 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ACTN4O43707 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ACTN4O43707 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ACTN4O43707 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ACTN4O43707 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ACTN4O43707 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.69■□□□□ 0.58
ACTN4O43707 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ACTN4O43707 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.69■□□□□ 0.58
ACTN4O43707 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms