Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLIC1O00299 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLIC1O00299 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.78■□□□□ 0.12
CLIC1O00299 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLIC1O00299 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLIC1O00299 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.78■□□□□ 0.12
CLIC1O00299 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLIC1O00299 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLIC1O00299 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLIC1O00299 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLIC1O00299 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLIC1O00299 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
CLIC1O00299 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLIC1O00299 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLIC1O00299 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.78■□□□□ 0.12
CLIC1O00299 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLIC1O00299 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLIC1O00299 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.78■□□□□ 0.12
CLIC1O00299 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLIC1O00299 RBM17P3-201ENST00000417687 1192 ntBASIC15.78■□□□□ 0.12
CLIC1O00299 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.78■□□□□ 0.12
CLIC1O00299 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CLIC1O00299 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.78■□□□□ 0.12
CLIC1O00299 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.78■□□□□ 0.12
CLIC1O00299 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.78■□□□□ 0.12
CLIC1O00299 MIR4492-201ENST00000581627 80 ntBASIC15.78■□□□□ 0.12
CLIC1O00299 MPDU1-223ENST00000582151 728 ntBASIC15.78■□□□□ 0.12
CLIC1O00299 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.78■□□□□ 0.12
CLIC1O00299 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLIC1O00299 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CLIC1O00299 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLIC1O00299 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.78■□□□□ 0.12
CLIC1O00299 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.78■□□□□ 0.12
CLIC1O00299 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CLIC1O00299 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLIC1O00299 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.77■□□□□ 0.12
CLIC1O00299 KRT8P39-201ENST00000396270 1433 ntBASIC15.77■□□□□ 0.12
CLIC1O00299 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.77■□□□□ 0.12
CLIC1O00299 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
CLIC1O00299 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLIC1O00299 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLIC1O00299 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.77■□□□□ 0.12
CLIC1O00299 AL031731.1-201ENST00000642131 2094 ntBASIC15.77■□□□□ 0.12
CLIC1O00299 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLIC1O00299 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLIC1O00299 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLIC1O00299 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLIC1O00299 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.77■□□□□ 0.12
CLIC1O00299 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CLIC1O00299 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLIC1O00299 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLIC1O00299 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.77■□□□□ 0.12
CLIC1O00299 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLIC1O00299 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLIC1O00299 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLIC1O00299 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLIC1O00299 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.77■□□□□ 0.12
CLIC1O00299 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLIC1O00299 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.77■□□□□ 0.12
CLIC1O00299 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CLIC1O00299 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
CLIC1O00299 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.77■□□□□ 0.12
CLIC1O00299 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.77■□□□□ 0.12
CLIC1O00299 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.77■□□□□ 0.12
CLIC1O00299 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.77■□□□□ 0.12
CLIC1O00299 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
CLIC1O00299 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CLIC1O00299 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CLIC1O00299 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CLIC1O00299 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLIC1O00299 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.77■□□□□ 0.11
CLIC1O00299 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLIC1O00299 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLIC1O00299 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CLIC1O00299 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLIC1O00299 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLIC1O00299 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CLIC1O00299 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLIC1O00299 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLIC1O00299 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CLIC1O00299 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.77■□□□□ 0.11
CLIC1O00299 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLIC1O00299 AC105917.1-201ENST00000506637 2539 ntBASIC15.76■□□□□ 0.11
CLIC1O00299 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.76■□□□□ 0.11
CLIC1O00299 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLIC1O00299 AC002310.6-201ENST00000624451 1377 ntBASIC15.76■□□□□ 0.11
CLIC1O00299 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLIC1O00299 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLIC1O00299 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLIC1O00299 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLIC1O00299 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLIC1O00299 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLIC1O00299 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLIC1O00299 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.76■□□□□ 0.11
CLIC1O00299 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLIC1O00299 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLIC1O00299 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.76■□□□□ 0.11
CLIC1O00299 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLIC1O00299 AC087163.2-201ENST00000457299 853 ntBASIC15.76■□□□□ 0.11
CLIC1O00299 FOSL1P1-201ENST00000511041 816 ntBASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms