Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TLR4O00206 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TLR4O00206 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
TLR4O00206 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TLR4O00206 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.52■□□□□ 0.24
TLR4O00206 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TLR4O00206 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TLR4O00206 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
TLR4O00206 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.52■□□□□ 0.24
TLR4O00206 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.52■□□□□ 0.24
TLR4O00206 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
TLR4O00206 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.52■□□□□ 0.24
TLR4O00206 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.52■□□□□ 0.24
TLR4O00206 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.52■□□□□ 0.24
TLR4O00206 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.52■□□□□ 0.24
TLR4O00206 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TLR4O00206 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TLR4O00206 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.52■□□□□ 0.24
TLR4O00206 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TLR4O00206 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.52■□□□□ 0.24
TLR4O00206 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TLR4O00206 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TLR4O00206 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.52■□□□□ 0.23
TLR4O00206 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
TLR4O00206 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
TLR4O00206 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TLR4O00206 AC016027.1-202ENST00000607927 1699 ntBASIC16.52■□□□□ 0.23
TLR4O00206 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TLR4O00206 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TLR4O00206 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TLR4O00206 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TLR4O00206 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.52■□□□□ 0.23
TLR4O00206 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TLR4O00206 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TLR4O00206 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
TLR4O00206 AC124067.4-201ENST00000519691 2379 ntBASIC16.51■□□□□ 0.23
TLR4O00206 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.51■□□□□ 0.23
TLR4O00206 FRMD8P1-201ENST00000440433 1524 ntBASIC16.51■□□□□ 0.23
TLR4O00206 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TLR4O00206 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TLR4O00206 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TLR4O00206 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.51■□□□□ 0.23
TLR4O00206 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TLR4O00206 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TLR4O00206 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TLR4O00206 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TLR4O00206 AC116353.5-201ENST00000638148 1699 ntBASIC16.51■□□□□ 0.23
TLR4O00206 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TLR4O00206 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TLR4O00206 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
TLR4O00206 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TLR4O00206 TREML5P-201ENST00000421694 576 ntBASIC16.51■□□□□ 0.23
TLR4O00206 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.51■□□□□ 0.23
TLR4O00206 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TLR4O00206 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TLR4O00206 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.51■□□□□ 0.23
TLR4O00206 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.51■□□□□ 0.23
TLR4O00206 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.51■□□□□ 0.23
TLR4O00206 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.51■□□□□ 0.23
TLR4O00206 MIR6080-201ENST00000617359 66 ntBASIC16.51■□□□□ 0.23
TLR4O00206 OR6D1P-203ENST00000641209 4860 ntBASIC16.51■□□□□ 0.23
TLR4O00206 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TLR4O00206 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TLR4O00206 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TLR4O00206 AL138688.1-201ENST00000624851 1594 ntBASIC16.51■□□□□ 0.23
TLR4O00206 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.51■□□□□ 0.23
TLR4O00206 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.51■□□□□ 0.23
TLR4O00206 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TLR4O00206 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.51■□□□□ 0.23
TLR4O00206 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TLR4O00206 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.5■□□□□ 0.23
TLR4O00206 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TLR4O00206 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TLR4O00206 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TLR4O00206 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.5■□□□□ 0.23
TLR4O00206 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TLR4O00206 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.5■□□□□ 0.23
TLR4O00206 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TLR4O00206 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TLR4O00206 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TLR4O00206 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TLR4O00206 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TLR4O00206 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.5■□□□□ 0.23
TLR4O00206 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.5■□□□□ 0.23
TLR4O00206 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.5■□□□□ 0.23
TLR4O00206 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.5■□□□□ 0.23
TLR4O00206 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TLR4O00206 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.5■□□□□ 0.23
TLR4O00206 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.5■□□□□ 0.23
TLR4O00206 IGHV3-42-201ENST00000520410 361 ntBASIC16.5■□□□□ 0.23
TLR4O00206 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.5■□□□□ 0.23
TLR4O00206 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.5■□□□□ 0.23
TLR4O00206 AC190387.1-201ENST00000551683 408 ntBASIC16.5■□□□□ 0.23
TLR4O00206 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TLR4O00206 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TLR4O00206 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
TLR4O00206 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TLR4O00206 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TLR4O00206 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
TLR4O00206 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms