Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.67■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.67■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.67■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 KLF2P3-201ENST00000451977 1087 ntBASIC16.67■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 AC125807.1-201ENST00000483097 614 ntBASIC16.67■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.67■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.67■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.67■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.67■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.67■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.67■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.67■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.67■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 SNX33P1-201ENST00000592116 1762 ntBASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 AC142381.1-201ENST00000426099 345 ntBASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 PCDHB18P-201ENST00000524813 2368 ntBASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 AC107890.1-201ENST00000422478 521 ntBASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 AC051619.7-201ENST00000568314 623 ntBASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.65■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
C1QTNF3-AMACRE9PGA6 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms