Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT2A6NDA9 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT2A6NDA9 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT2A6NDA9 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.86■□□□□ 0.13
LRIT2A6NDA9 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT2A6NDA9 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
LRIT2A6NDA9 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.86■□□□□ 0.13
LRIT2A6NDA9 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.86■□□□□ 0.13
LRIT2A6NDA9 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.86■□□□□ 0.13
LRIT2A6NDA9 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.86■□□□□ 0.13
LRIT2A6NDA9 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.86■□□□□ 0.13
LRIT2A6NDA9 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 AC023274.1-201ENST00000418278 595 ntBASIC15.85■□□□□ 0.13
LRIT2A6NDA9 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 AC092474.2-201ENST00000424288 719 ntBASIC15.85■□□□□ 0.13
LRIT2A6NDA9 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 AC068137.2-201ENST00000605408 478 ntBASIC15.85■□□□□ 0.13
LRIT2A6NDA9 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 AC092919.2-201ENST00000623631 1645 ntBASIC15.85■□□□□ 0.13
LRIT2A6NDA9 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRIT2A6NDA9 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 ME2P1-201ENST00000426028 1970 ntBASIC15.84■□□□□ 0.13
LRIT2A6NDA9 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 AP002472.1-201ENST00000577490 586 ntBASIC15.84■□□□□ 0.13
LRIT2A6NDA9 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 PMS2P7-201ENST00000506558 1336 ntBASIC15.84■□□□□ 0.13
LRIT2A6NDA9 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LRIT2A6NDA9 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LRIT2A6NDA9 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRIT2A6NDA9 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.83■□□□□ 0.13
LRIT2A6NDA9 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRIT2A6NDA9 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms