Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 PCGF3-213ENST00000620529 1899 ntBASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
TCRBV3S1A0A5B6 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 MIR648-201ENST00000385046 94 ntBASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 YBX1P2-201ENST00000489612 999 ntBASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.64■□□□□ 0.09
TCRBV3S1A0A5B6 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 TOP3BP1-201ENST00000420768 1380 ntBASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 SPDYE13P-201ENST00000445314 798 ntBASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 AC010203.1-204ENST00000548782 407 ntBASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 MIR4492-201ENST00000581627 80 ntBASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 AC010654.1-201ENST00000615722 808 ntBASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TCRBV3S1A0A5B6 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms