Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC28.22■■■□□ 2.11
SNCAIPQ9Y6H5 TRIR-202ENST00000588213 841 ntTSL 3 BASIC28.22■■■□□ 2.11
SNCAIPQ9Y6H5 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
SNCAIPQ9Y6H5 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
SNCAIPQ9Y6H5 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SNCAIPQ9Y6H5 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
SNCAIPQ9Y6H5 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
SNCAIPQ9Y6H5 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
SNCAIPQ9Y6H5 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
SNCAIPQ9Y6H5 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SNCAIPQ9Y6H5 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC28.2■■■□□ 2.1
SNCAIPQ9Y6H5 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SNCAIPQ9Y6H5 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC28.19■■■□□ 2.1
SNCAIPQ9Y6H5 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC28.19■■■□□ 2.1
SNCAIPQ9Y6H5 MIR4281-201ENST00000580852 62 ntBASIC28.19■■■□□ 2.1
SNCAIPQ9Y6H5 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SNCAIPQ9Y6H5 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC28.18■■■□□ 2.1
SNCAIPQ9Y6H5 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SNCAIPQ9Y6H5 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC28.17■■■□□ 2.1
SNCAIPQ9Y6H5 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SNCAIPQ9Y6H5 AL139246.5-201ENST00000606645 996 ntBASIC28.17■■■□□ 2.1
SNCAIPQ9Y6H5 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC28.17■■■□□ 2.1
SNCAIPQ9Y6H5 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC28.17■■■□□ 2.1
SNCAIPQ9Y6H5 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SNCAIPQ9Y6H5 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
SNCAIPQ9Y6H5 AC142472.1-201ENST00000612013 1741 ntBASIC28.16■■■□□ 2.1
SNCAIPQ9Y6H5 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC28.16■■■□□ 2.1
SNCAIPQ9Y6H5 RPP21-222ENST00000433076 577 ntTSL 2 BASIC28.16■■■□□ 2.1
SNCAIPQ9Y6H5 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
SNCAIPQ9Y6H5 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SNCAIPQ9Y6H5 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SNCAIPQ9Y6H5 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC28.15■■■□□ 2.1
SNCAIPQ9Y6H5 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC28.15■■■□□ 2.1
SNCAIPQ9Y6H5 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC28.15■■■□□ 2.1
SNCAIPQ9Y6H5 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SNCAIPQ9Y6H5 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC28.14■■■□□ 2.1
SNCAIPQ9Y6H5 NALT1-201ENST00000429224 738 ntTSL 5 BASIC28.14■■■□□ 2.1
SNCAIPQ9Y6H5 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC28.14■■■□□ 2.1
SNCAIPQ9Y6H5 SRR-208ENST00000576848 588 ntTSL 4 BASIC28.14■■■□□ 2.1
SNCAIPQ9Y6H5 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC28.14■■■□□ 2.1
SNCAIPQ9Y6H5 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
SNCAIPQ9Y6H5 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
SNCAIPQ9Y6H5 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SNCAIPQ9Y6H5 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC28.13■■■□□ 2.09
SNCAIPQ9Y6H5 RALB-208ENST00000631312 311 ntTSL 5 BASIC28.13■■■□□ 2.09
SNCAIPQ9Y6H5 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SNCAIPQ9Y6H5 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
SNCAIPQ9Y6H5 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
SNCAIPQ9Y6H5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC28.12■■■□□ 2.09
SNCAIPQ9Y6H5 AL117332.1-201ENST00000622628 974 ntBASIC28.12■■■□□ 2.09
SNCAIPQ9Y6H5 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
SNCAIPQ9Y6H5 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
SNCAIPQ9Y6H5 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
SNCAIPQ9Y6H5 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC28.11■■■□□ 2.09
SNCAIPQ9Y6H5 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC28.11■■■□□ 2.09
SNCAIPQ9Y6H5 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC28.11■■■□□ 2.09
SNCAIPQ9Y6H5 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
SNCAIPQ9Y6H5 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
SNCAIPQ9Y6H5 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
SNCAIPQ9Y6H5 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC28.1■■■□□ 2.09
SNCAIPQ9Y6H5 AC139426.1-201ENST00000568218 2529 ntBASIC28.1■■■□□ 2.09
SNCAIPQ9Y6H5 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
SNCAIPQ9Y6H5 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
SNCAIPQ9Y6H5 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
SNCAIPQ9Y6H5 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
SNCAIPQ9Y6H5 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
SNCAIPQ9Y6H5 AL136116.3-201ENST00000402907 1138 ntBASIC28.09■■■□□ 2.09
SNCAIPQ9Y6H5 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC28.09■■■□□ 2.09
SNCAIPQ9Y6H5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
SNCAIPQ9Y6H5 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
SNCAIPQ9Y6H5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
SNCAIPQ9Y6H5 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
SNCAIPQ9Y6H5 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
SNCAIPQ9Y6H5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC28.08■■■□□ 2.09
SNCAIPQ9Y6H5 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.08
SNCAIPQ9Y6H5 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC28.07■■■□□ 2.08
SNCAIPQ9Y6H5 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC28.07■■■□□ 2.08
SNCAIPQ9Y6H5 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC28.07■■■□□ 2.08
SNCAIPQ9Y6H5 AC010997.5-201ENST00000609182 354 ntBASIC28.07■■■□□ 2.08
SNCAIPQ9Y6H5 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
SNCAIPQ9Y6H5 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC28.06■■■□□ 2.08
SNCAIPQ9Y6H5 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
SNCAIPQ9Y6H5 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SNCAIPQ9Y6H5 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC28.06■■■□□ 2.08
SNCAIPQ9Y6H5 SENP5-202ENST00000419026 973 ntTSL 3 BASIC28.06■■■□□ 2.08
SNCAIPQ9Y6H5 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
SNCAIPQ9Y6H5 MIR3621-201ENST00000580529 85 ntBASIC28.06■■■□□ 2.08
SNCAIPQ9Y6H5 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SNCAIPQ9Y6H5 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC28.05■■■□□ 2.08
SNCAIPQ9Y6H5 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC28.05■■■□□ 2.08
SNCAIPQ9Y6H5 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SNCAIPQ9Y6H5 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC28.05■■■□□ 2.08
SNCAIPQ9Y6H5 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SNCAIPQ9Y6H5 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
SNCAIPQ9Y6H5 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
SNCAIPQ9Y6H5 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC28.04■■■□□ 2.08
SNCAIPQ9Y6H5 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC28.04■■■□□ 2.08
SNCAIPQ9Y6H5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC28.04■■■□□ 2.08
SNCAIPQ9Y6H5 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC28.04■■■□□ 2.08
SNCAIPQ9Y6H5 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC28.04■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms