Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SPCS1Q9Y6A9 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SPCS1Q9Y6A9 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.5■□□□□ 0.23
SPCS1Q9Y6A9 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SPCS1Q9Y6A9 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SPCS1Q9Y6A9 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SPCS1Q9Y6A9 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPCS1Q9Y6A9 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SPCS1Q9Y6A9 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPCS1Q9Y6A9 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
SPCS1Q9Y6A9 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPCS1Q9Y6A9 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SPCS1Q9Y6A9 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPCS1Q9Y6A9 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SPCS1Q9Y6A9 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SPCS1Q9Y6A9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SPCS1Q9Y6A9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SPCS1Q9Y6A9 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SPCS1Q9Y6A9 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SPCS1Q9Y6A9 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC16.48■□□□□ 0.23
SPCS1Q9Y6A9 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SPCS1Q9Y6A9 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SPCS1Q9Y6A9 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SPCS1Q9Y6A9 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SPCS1Q9Y6A9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SPCS1Q9Y6A9 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SPCS1Q9Y6A9 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SPCS1Q9Y6A9 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SPCS1Q9Y6A9 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SPCS1Q9Y6A9 MYB-221ENST00000527615 2381 ntTSL 5 BASIC16.46■□□□□ 0.23
SPCS1Q9Y6A9 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SPCS1Q9Y6A9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SPCS1Q9Y6A9 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SPCS1Q9Y6A9 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC16.46■□□□□ 0.23
SPCS1Q9Y6A9 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SPCS1Q9Y6A9 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SPCS1Q9Y6A9 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC16.46■□□□□ 0.22
SPCS1Q9Y6A9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPCS1Q9Y6A9 AC022211.4-201ENST00000625094 2161 ntBASIC16.45■□□□□ 0.22
SPCS1Q9Y6A9 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SPCS1Q9Y6A9 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.45■□□□□ 0.22
SPCS1Q9Y6A9 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPCS1Q9Y6A9 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC16.45■□□□□ 0.22
SPCS1Q9Y6A9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC16.45■□□□□ 0.22
SPCS1Q9Y6A9 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.45■□□□□ 0.22
SPCS1Q9Y6A9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPCS1Q9Y6A9 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SPCS1Q9Y6A9 WHAMMP3-201ENST00000611636 1609 ntBASIC16.45■□□□□ 0.22
SPCS1Q9Y6A9 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC16.44■□□□□ 0.22
SPCS1Q9Y6A9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SPCS1Q9Y6A9 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SPCS1Q9Y6A9 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SPCS1Q9Y6A9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SPCS1Q9Y6A9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SPCS1Q9Y6A9 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC16.44■□□□□ 0.22
SPCS1Q9Y6A9 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SPCS1Q9Y6A9 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC16.44■□□□□ 0.22
SPCS1Q9Y6A9 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC16.43■□□□□ 0.22
SPCS1Q9Y6A9 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC16.43■□□□□ 0.22
SPCS1Q9Y6A9 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SPCS1Q9Y6A9 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SPCS1Q9Y6A9 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SPCS1Q9Y6A9 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SPCS1Q9Y6A9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SPCS1Q9Y6A9 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SPCS1Q9Y6A9 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SPCS1Q9Y6A9 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SPCS1Q9Y6A9 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
SPCS1Q9Y6A9 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SPCS1Q9Y6A9 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SPCS1Q9Y6A9 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SPCS1Q9Y6A9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SPCS1Q9Y6A9 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
SPCS1Q9Y6A9 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.42■□□□□ 0.22
SPCS1Q9Y6A9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC16.42■□□□□ 0.22
SPCS1Q9Y6A9 AP004833.2-201ENST00000532228 1454 ntBASIC16.42■□□□□ 0.22
SPCS1Q9Y6A9 EP400NL-214ENST00000641289 2402 ntBASIC16.41■□□□□ 0.22
SPCS1Q9Y6A9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPCS1Q9Y6A9 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SPCS1Q9Y6A9 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPCS1Q9Y6A9 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC16.41■□□□□ 0.22
SPCS1Q9Y6A9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SPCS1Q9Y6A9 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.41■□□□□ 0.22
SPCS1Q9Y6A9 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SPCS1Q9Y6A9 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPCS1Q9Y6A9 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SPCS1Q9Y6A9 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SPCS1Q9Y6A9 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SPCS1Q9Y6A9 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SPCS1Q9Y6A9 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPCS1Q9Y6A9 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC16.4■□□□□ 0.22
SPCS1Q9Y6A9 LINC01124-201ENST00000409786 2117 ntBASIC16.4■□□□□ 0.22
SPCS1Q9Y6A9 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SPCS1Q9Y6A9 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPCS1Q9Y6A9 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPCS1Q9Y6A9 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPCS1Q9Y6A9 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SPCS1Q9Y6A9 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPCS1Q9Y6A9 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SPCS1Q9Y6A9 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms