Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC30.81■■■□□ 2.52
USP16Q9Y5T5 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
USP16Q9Y5T5 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC30.8■■■□□ 2.52
USP16Q9Y5T5 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC30.8■■■□□ 2.52
USP16Q9Y5T5 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC30.8■■■□□ 2.52
USP16Q9Y5T5 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC30.8■■■□□ 2.52
USP16Q9Y5T5 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC30.8■■■□□ 2.52
USP16Q9Y5T5 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC30.8■■■□□ 2.52
USP16Q9Y5T5 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC30.8■■■□□ 2.52
USP16Q9Y5T5 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
USP16Q9Y5T5 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
USP16Q9Y5T5 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
USP16Q9Y5T5 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
USP16Q9Y5T5 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
USP16Q9Y5T5 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC30.79■■■□□ 2.52
USP16Q9Y5T5 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC30.78■■■□□ 2.52
USP16Q9Y5T5 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC30.78■■■□□ 2.52
USP16Q9Y5T5 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
USP16Q9Y5T5 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
USP16Q9Y5T5 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
USP16Q9Y5T5 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC30.77■■■□□ 2.52
USP16Q9Y5T5 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC30.77■■■□□ 2.52
USP16Q9Y5T5 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC30.77■■■□□ 2.52
USP16Q9Y5T5 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
USP16Q9Y5T5 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC30.76■■■□□ 2.52
USP16Q9Y5T5 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC30.76■■■□□ 2.51
USP16Q9Y5T5 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC30.76■■■□□ 2.51
USP16Q9Y5T5 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
USP16Q9Y5T5 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
USP16Q9Y5T5 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC30.75■■■□□ 2.51
USP16Q9Y5T5 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
USP16Q9Y5T5 AC120024.1-201ENST00000562672 995 ntBASIC30.75■■■□□ 2.51
USP16Q9Y5T5 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
USP16Q9Y5T5 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
USP16Q9Y5T5 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC30.74■■■□□ 2.51
USP16Q9Y5T5 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
USP16Q9Y5T5 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
USP16Q9Y5T5 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
USP16Q9Y5T5 MTURN-203ENST00000409688 843 ntTSL 2 BASIC30.73■■■□□ 2.51
USP16Q9Y5T5 MIR4787-201ENST00000607364 84 ntBASIC30.73■■■□□ 2.51
USP16Q9Y5T5 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC30.73■■■□□ 2.51
USP16Q9Y5T5 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
USP16Q9Y5T5 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC30.73■■■□□ 2.51
USP16Q9Y5T5 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
USP16Q9Y5T5 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC30.73■■■□□ 2.51
USP16Q9Y5T5 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
USP16Q9Y5T5 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
USP16Q9Y5T5 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
USP16Q9Y5T5 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC30.72■■■□□ 2.51
USP16Q9Y5T5 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC30.72■■■□□ 2.51
USP16Q9Y5T5 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC30.72■■■□□ 2.51
USP16Q9Y5T5 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC30.72■■■□□ 2.51
USP16Q9Y5T5 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
USP16Q9Y5T5 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
USP16Q9Y5T5 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC30.71■■■□□ 2.51
USP16Q9Y5T5 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
USP16Q9Y5T5 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
USP16Q9Y5T5 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC30.7■■■□□ 2.51
USP16Q9Y5T5 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC30.7■■■□□ 2.5
USP16Q9Y5T5 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.5
USP16Q9Y5T5 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
USP16Q9Y5T5 BX664725.1-201ENST00000438252 379 ntBASIC30.69■■■□□ 2.5
USP16Q9Y5T5 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
USP16Q9Y5T5 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
USP16Q9Y5T5 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
USP16Q9Y5T5 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC30.68■■■□□ 2.5
USP16Q9Y5T5 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC30.68■■■□□ 2.5
USP16Q9Y5T5 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
USP16Q9Y5T5 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
USP16Q9Y5T5 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC30.68■■■□□ 2.5
USP16Q9Y5T5 AC137630.3-201ENST00000607245 391 ntBASIC30.68■■■□□ 2.5
USP16Q9Y5T5 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
USP16Q9Y5T5 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
USP16Q9Y5T5 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
USP16Q9Y5T5 UNC93B8-201ENST00000511903 705 ntBASIC30.67■■■□□ 2.5
USP16Q9Y5T5 KRT125P-201ENST00000546827 989 ntBASIC30.67■■■□□ 2.5
USP16Q9Y5T5 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
USP16Q9Y5T5 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
USP16Q9Y5T5 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
USP16Q9Y5T5 GRAMD4P7-201ENST00000578182 1232 ntBASIC30.66■■■□□ 2.5
USP16Q9Y5T5 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
USP16Q9Y5T5 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC30.66■■■□□ 2.5
USP16Q9Y5T5 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC30.66■■■□□ 2.5
USP16Q9Y5T5 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC30.65■■■□□ 2.5
USP16Q9Y5T5 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC30.65■■■□□ 2.5
USP16Q9Y5T5 SNAI3-AS1-204ENST00000567997 2048 ntBASIC30.65■■■□□ 2.5
USP16Q9Y5T5 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
USP16Q9Y5T5 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
USP16Q9Y5T5 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC30.65■■■□□ 2.5
USP16Q9Y5T5 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
USP16Q9Y5T5 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
USP16Q9Y5T5 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC30.64■■■□□ 2.5
USP16Q9Y5T5 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC30.64■■■□□ 2.5
USP16Q9Y5T5 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.5
USP16Q9Y5T5 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC30.63■■■□□ 2.49
USP16Q9Y5T5 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC30.63■■■□□ 2.49
USP16Q9Y5T5 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC30.63■■■□□ 2.49
USP16Q9Y5T5 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC30.63■■■□□ 2.49
USP16Q9Y5T5 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
USP16Q9Y5T5 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC30.62■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms