Protein–RNA interactions for Protein: Q9Y5H7

PCDHA5, Protocadherin alpha-5, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA5Q9Y5H7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
PCDHA5Q9Y5H7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
PCDHA5Q9Y5H7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
PCDHA5Q9Y5H7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
PCDHA5Q9Y5H7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
PCDHA5Q9Y5H7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
PCDHA5Q9Y5H7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PCDHA5Q9Y5H7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PCDHA5Q9Y5H7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
PCDHA5Q9Y5H7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.75■■□□□ 1.87
PCDHA5Q9Y5H7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHA5Q9Y5H7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHA5Q9Y5H7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHA5Q9Y5H7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHA5Q9Y5H7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC26.73■■□□□ 1.87
PCDHA5Q9Y5H7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHA5Q9Y5H7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHA5Q9Y5H7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC26.73■■□□□ 1.87
PCDHA5Q9Y5H7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHA5Q9Y5H7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHA5Q9Y5H7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHA5Q9Y5H7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHA5Q9Y5H7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHA5Q9Y5H7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHA5Q9Y5H7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
PCDHA5Q9Y5H7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.71■■□□□ 1.87
PCDHA5Q9Y5H7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC26.71■■□□□ 1.87
PCDHA5Q9Y5H7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PCDHA5Q9Y5H7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PCDHA5Q9Y5H7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PCDHA5Q9Y5H7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
PCDHA5Q9Y5H7 AC092296.2-201ENST00000589470 999 ntBASIC26.7■■□□□ 1.86
PCDHA5Q9Y5H7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
PCDHA5Q9Y5H7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.7■■□□□ 1.86
PCDHA5Q9Y5H7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHA5Q9Y5H7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.69■■□□□ 1.86
PCDHA5Q9Y5H7 SMPD5-203ENST00000639008 1464 ntBASIC26.69■■□□□ 1.86
PCDHA5Q9Y5H7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHA5Q9Y5H7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC26.69■■□□□ 1.86
PCDHA5Q9Y5H7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHA5Q9Y5H7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC26.69■■□□□ 1.86
PCDHA5Q9Y5H7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHA5Q9Y5H7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHA5Q9Y5H7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
PCDHA5Q9Y5H7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHA5Q9Y5H7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
PCDHA5Q9Y5H7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
PCDHA5Q9Y5H7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.68■■□□□ 1.86
PCDHA5Q9Y5H7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC26.68■■□□□ 1.86
PCDHA5Q9Y5H7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
PCDHA5Q9Y5H7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
PCDHA5Q9Y5H7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.67■■□□□ 1.86
PCDHA5Q9Y5H7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.67■■□□□ 1.86
PCDHA5Q9Y5H7 MIR3960-201ENST00000583311 91 ntBASIC26.67■■□□□ 1.86
PCDHA5Q9Y5H7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
PCDHA5Q9Y5H7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
PCDHA5Q9Y5H7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHA5Q9Y5H7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHA5Q9Y5H7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHA5Q9Y5H7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHA5Q9Y5H7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
PCDHA5Q9Y5H7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.66■■□□□ 1.86
PCDHA5Q9Y5H7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.65■■□□□ 1.86
PCDHA5Q9Y5H7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.65■■□□□ 1.86
PCDHA5Q9Y5H7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC26.65■■□□□ 1.86
PCDHA5Q9Y5H7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26.65■■□□□ 1.86
PCDHA5Q9Y5H7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHA5Q9Y5H7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
PCDHA5Q9Y5H7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
PCDHA5Q9Y5H7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC26.64■■□□□ 1.86
PCDHA5Q9Y5H7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.64■■□□□ 1.86
PCDHA5Q9Y5H7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHA5Q9Y5H7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.63■■□□□ 1.85
PCDHA5Q9Y5H7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.63■■□□□ 1.85
PCDHA5Q9Y5H7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHA5Q9Y5H7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
PCDHA5Q9Y5H7 AP003733.4-201ENST00000623785 1697 ntBASIC26.63■■□□□ 1.85
PCDHA5Q9Y5H7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHA5Q9Y5H7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHA5Q9Y5H7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC26.62■■□□□ 1.85
PCDHA5Q9Y5H7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.62■■□□□ 1.85
PCDHA5Q9Y5H7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC26.62■■□□□ 1.85
PCDHA5Q9Y5H7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHA5Q9Y5H7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHA5Q9Y5H7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHA5Q9Y5H7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHA5Q9Y5H7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHA5Q9Y5H7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHA5Q9Y5H7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
PCDHA5Q9Y5H7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
PCDHA5Q9Y5H7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHA5Q9Y5H7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHA5Q9Y5H7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHA5Q9Y5H7 ECEL1P2-201ENST00000461596 1295 ntBASIC26.6■■□□□ 1.85
PCDHA5Q9Y5H7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHA5Q9Y5H7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.6■■□□□ 1.85
PCDHA5Q9Y5H7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHA5Q9Y5H7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
PCDHA5Q9Y5H7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHA5Q9Y5H7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms