Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
KCNIP1Q9NZI2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.94■□□□□ 0.78
KCNIP1Q9NZI2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KCNIP1Q9NZI2 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KCNIP1Q9NZI2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KCNIP1Q9NZI2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
KCNIP1Q9NZI2 AC060814.1-201ENST00000554326 538 ntBASIC19.94■□□□□ 0.78
KCNIP1Q9NZI2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KCNIP1Q9NZI2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
KCNIP1Q9NZI2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KCNIP1Q9NZI2 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KCNIP1Q9NZI2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KCNIP1Q9NZI2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KCNIP1Q9NZI2 SMPD5-203ENST00000639008 1464 ntBASIC19.92■□□□□ 0.78
KCNIP1Q9NZI2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KCNIP1Q9NZI2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
KCNIP1Q9NZI2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KCNIP1Q9NZI2 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
KCNIP1Q9NZI2 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
KCNIP1Q9NZI2 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KCNIP1Q9NZI2 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.92■□□□□ 0.78
KCNIP1Q9NZI2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KCNIP1Q9NZI2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.92■□□□□ 0.78
KCNIP1Q9NZI2 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KCNIP1Q9NZI2 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
KCNIP1Q9NZI2 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNIP1Q9NZI2 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNIP1Q9NZI2 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNIP1Q9NZI2 AC097639.1-201ENST00000565519 1891 ntBASIC19.91■□□□□ 0.78
KCNIP1Q9NZI2 AL157400.5-201ENST00000507624 621 ntBASIC19.91■□□□□ 0.78
KCNIP1Q9NZI2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KCNIP1Q9NZI2 AC025884.2-201ENST00000553429 711 ntBASIC19.91■□□□□ 0.78
KCNIP1Q9NZI2 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.91■□□□□ 0.78
KCNIP1Q9NZI2 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.91■□□□□ 0.78
KCNIP1Q9NZI2 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNIP1Q9NZI2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
KCNIP1Q9NZI2 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KCNIP1Q9NZI2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KCNIP1Q9NZI2 AC022211.4-201ENST00000625094 2161 ntBASIC19.9■□□□□ 0.78
KCNIP1Q9NZI2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.9■□□□□ 0.78
KCNIP1Q9NZI2 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KCNIP1Q9NZI2 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KCNIP1Q9NZI2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
KCNIP1Q9NZI2 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
KCNIP1Q9NZI2 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KCNIP1Q9NZI2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KCNIP1Q9NZI2 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KCNIP1Q9NZI2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KCNIP1Q9NZI2 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.88■□□□□ 0.77
KCNIP1Q9NZI2 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KCNIP1Q9NZI2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.88■□□□□ 0.77
KCNIP1Q9NZI2 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.88■□□□□ 0.77
KCNIP1Q9NZI2 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KCNIP1Q9NZI2 AC022413.1-201ENST00000624602 984 ntBASIC19.88■□□□□ 0.77
KCNIP1Q9NZI2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KCNIP1Q9NZI2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.88■□□□□ 0.77
KCNIP1Q9NZI2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KCNIP1Q9NZI2 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
KCNIP1Q9NZI2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KCNIP1Q9NZI2 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KCNIP1Q9NZI2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KCNIP1Q9NZI2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
KCNIP1Q9NZI2 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KCNIP1Q9NZI2 ECEL1P2-201ENST00000461596 1295 ntBASIC19.86■□□□□ 0.77
KCNIP1Q9NZI2 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.86■□□□□ 0.77
KCNIP1Q9NZI2 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.86■□□□□ 0.77
KCNIP1Q9NZI2 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KCNIP1Q9NZI2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
KCNIP1Q9NZI2 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
KCNIP1Q9NZI2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.85■□□□□ 0.77
KCNIP1Q9NZI2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KCNIP1Q9NZI2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.85■□□□□ 0.77
KCNIP1Q9NZI2 AC092296.2-201ENST00000589470 999 ntBASIC19.85■□□□□ 0.77
KCNIP1Q9NZI2 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KCNIP1Q9NZI2 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
KCNIP1Q9NZI2 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KCNIP1Q9NZI2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KCNIP1Q9NZI2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KCNIP1Q9NZI2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KCNIP1Q9NZI2 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KCNIP1Q9NZI2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.83■□□□□ 0.77
KCNIP1Q9NZI2 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
KCNIP1Q9NZI2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
KCNIP1Q9NZI2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
KCNIP1Q9NZI2 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
KCNIP1Q9NZI2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
KCNIP1Q9NZI2 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KCNIP1Q9NZI2 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KCNIP1Q9NZI2 AC138932.3-201ENST00000567634 1902 ntBASIC19.82■□□□□ 0.76
KCNIP1Q9NZI2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KCNIP1Q9NZI2 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KCNIP1Q9NZI2 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
KCNIP1Q9NZI2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.82■□□□□ 0.76
KCNIP1Q9NZI2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.82■□□□□ 0.76
KCNIP1Q9NZI2 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KCNIP1Q9NZI2 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KCNIP1Q9NZI2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KCNIP1Q9NZI2 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KCNIP1Q9NZI2 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KCNIP1Q9NZI2 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms