Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCNX3Q9H6A9 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.79■■□□□ 1.08
PCNX3Q9H6A9 MIR6765-201ENST00000614092 87 ntBASIC21.79■■□□□ 1.08
PCNX3Q9H6A9 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCNX3Q9H6A9 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCNX3Q9H6A9 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PCNX3Q9H6A9 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCNX3Q9H6A9 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.78■■□□□ 1.08
PCNX3Q9H6A9 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCNX3Q9H6A9 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCNX3Q9H6A9 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCNX3Q9H6A9 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCNX3Q9H6A9 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCNX3Q9H6A9 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCNX3Q9H6A9 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.77■■□□□ 1.08
PCNX3Q9H6A9 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCNX3Q9H6A9 PVT1_1.1-201ENST00000615125 194 ntBASIC21.77■■□□□ 1.08
PCNX3Q9H6A9 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCNX3Q9H6A9 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCNX3Q9H6A9 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PCNX3Q9H6A9 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PCNX3Q9H6A9 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCNX3Q9H6A9 AC145676.1-201ENST00000514988 2004 ntBASIC21.76■■□□□ 1.07
PCNX3Q9H6A9 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCNX3Q9H6A9 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCNX3Q9H6A9 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
PCNX3Q9H6A9 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.76■■□□□ 1.07
PCNX3Q9H6A9 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCNX3Q9H6A9 AC020928.2-201ENST00000588717 2197 ntBASIC21.75■■□□□ 1.07
PCNX3Q9H6A9 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCNX3Q9H6A9 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCNX3Q9H6A9 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCNX3Q9H6A9 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PCNX3Q9H6A9 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCNX3Q9H6A9 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCNX3Q9H6A9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCNX3Q9H6A9 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PCNX3Q9H6A9 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCNX3Q9H6A9 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
PCNX3Q9H6A9 ATP5G2P3-201ENST00000429083 425 ntBASIC21.74■■□□□ 1.07
PCNX3Q9H6A9 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.74■■□□□ 1.07
PCNX3Q9H6A9 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.74■■□□□ 1.07
PCNX3Q9H6A9 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCNX3Q9H6A9 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.74■■□□□ 1.07
PCNX3Q9H6A9 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
PCNX3Q9H6A9 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PCNX3Q9H6A9 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.73■■□□□ 1.07
PCNX3Q9H6A9 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCNX3Q9H6A9 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.73■■□□□ 1.07
PCNX3Q9H6A9 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCNX3Q9H6A9 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.73■■□□□ 1.07
PCNX3Q9H6A9 DUX4L18-201ENST00000553347 1267 ntBASIC21.73■■□□□ 1.07
PCNX3Q9H6A9 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.73■■□□□ 1.07
PCNX3Q9H6A9 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
PCNX3Q9H6A9 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.73■■□□□ 1.07
PCNX3Q9H6A9 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCNX3Q9H6A9 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCNX3Q9H6A9 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCNX3Q9H6A9 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCNX3Q9H6A9 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCNX3Q9H6A9 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCNX3Q9H6A9 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.72■■□□□ 1.07
PCNX3Q9H6A9 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCNX3Q9H6A9 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCNX3Q9H6A9 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCNX3Q9H6A9 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCNX3Q9H6A9 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCNX3Q9H6A9 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCNX3Q9H6A9 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCNX3Q9H6A9 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCNX3Q9H6A9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCNX3Q9H6A9 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PCNX3Q9H6A9 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCNX3Q9H6A9 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCNX3Q9H6A9 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.7■■□□□ 1.06
PCNX3Q9H6A9 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCNX3Q9H6A9 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCNX3Q9H6A9 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.7■■□□□ 1.06
PCNX3Q9H6A9 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCNX3Q9H6A9 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.7■■□□□ 1.06
PCNX3Q9H6A9 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCNX3Q9H6A9 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCNX3Q9H6A9 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCNX3Q9H6A9 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.69■■□□□ 1.06
PCNX3Q9H6A9 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.69■■□□□ 1.06
PCNX3Q9H6A9 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCNX3Q9H6A9 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCNX3Q9H6A9 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCNX3Q9H6A9 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCNX3Q9H6A9 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCNX3Q9H6A9 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
PCNX3Q9H6A9 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCNX3Q9H6A9 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.67■■□□□ 1.06
PCNX3Q9H6A9 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.67■■□□□ 1.06
PCNX3Q9H6A9 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.67■■□□□ 1.06
PCNX3Q9H6A9 AC087393.1-201ENST00000582896 145 ntBASIC21.67■■□□□ 1.06
PCNX3Q9H6A9 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCNX3Q9H6A9 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.67■■□□□ 1.06
PCNX3Q9H6A9 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCNX3Q9H6A9 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms