Protein–RNA interactions for Protein: Q9H2X0

CHRD, Chordin, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDQ9H2X0 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
CHRDQ9H2X0 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHRDQ9H2X0 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CHRDQ9H2X0 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHRDQ9H2X0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CHRDQ9H2X0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CHRDQ9H2X0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHRDQ9H2X0 MIR6724-1-201ENST00000616420 92 ntBASIC24.3■■□□□ 1.48
CHRDQ9H2X0 MIR6724-2-201ENST00000616483 92 ntBASIC24.3■■□□□ 1.48
CHRDQ9H2X0 MIR6724-4-201ENST00000617390 92 ntBASIC24.3■■□□□ 1.48
CHRDQ9H2X0 MIR6724-3-201ENST00000622482 92 ntBASIC24.3■■□□□ 1.48
CHRDQ9H2X0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CHRDQ9H2X0 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHRDQ9H2X0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
CHRDQ9H2X0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
CHRDQ9H2X0 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHRDQ9H2X0 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC24.29■■□□□ 1.48
CHRDQ9H2X0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHRDQ9H2X0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHRDQ9H2X0 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHRDQ9H2X0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC24.28■■□□□ 1.48
CHRDQ9H2X0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CHRDQ9H2X0 AC005837.3-201ENST00000612163 286 ntBASIC24.28■■□□□ 1.48
CHRDQ9H2X0 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.28■■□□□ 1.48
CHRDQ9H2X0 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
CHRDQ9H2X0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
CHRDQ9H2X0 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
CHRDQ9H2X0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHRDQ9H2X0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.27■■□□□ 1.48
CHRDQ9H2X0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC24.27■■□□□ 1.48
CHRDQ9H2X0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
CHRDQ9H2X0 MTDHP2-201ENST00000601468 714 ntBASIC24.27■■□□□ 1.48
CHRDQ9H2X0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.27■■□□□ 1.48
CHRDQ9H2X0 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.27■■□□□ 1.48
CHRDQ9H2X0 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHRDQ9H2X0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHRDQ9H2X0 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHRDQ9H2X0 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC24.26■■□□□ 1.47
CHRDQ9H2X0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
CHRDQ9H2X0 AL356740.2-201ENST00000601559 647 ntBASIC24.26■■□□□ 1.47
CHRDQ9H2X0 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHRDQ9H2X0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.26■■□□□ 1.47
CHRDQ9H2X0 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHRDQ9H2X0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.25■■□□□ 1.47
CHRDQ9H2X0 AC096631.2-201ENST00000436136 790 ntBASIC24.25■■□□□ 1.47
CHRDQ9H2X0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC24.25■■□□□ 1.47
CHRDQ9H2X0 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHRDQ9H2X0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CHRDQ9H2X0 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.24■■□□□ 1.47
CHRDQ9H2X0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.24■■□□□ 1.47
CHRDQ9H2X0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CHRDQ9H2X0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.24■■□□□ 1.47
CHRDQ9H2X0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
CHRDQ9H2X0 ST7-202ENST00000323984 2142 ntTSL 5 BASIC24.23■■□□□ 1.47
CHRDQ9H2X0 ST7-207ENST00000393449 2127 ntTSL 5 BASIC24.23■■□□□ 1.47
CHRDQ9H2X0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CHRDQ9H2X0 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.23■■□□□ 1.47
CHRDQ9H2X0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC24.23■■□□□ 1.47
CHRDQ9H2X0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC24.23■■□□□ 1.47
CHRDQ9H2X0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.23■■□□□ 1.47
CHRDQ9H2X0 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CHRDQ9H2X0 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CHRDQ9H2X0 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CHRDQ9H2X0 AC133561.4-201ENST00000566112 224 ntBASIC24.22■■□□□ 1.47
CHRDQ9H2X0 MIR4466-201ENST00000606121 54 ntBASIC24.22■■□□□ 1.47
CHRDQ9H2X0 BX255925.1-201ENST00000566954 1854 ntBASIC24.21■■□□□ 1.47
CHRDQ9H2X0 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC24.21■■□□□ 1.47
CHRDQ9H2X0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.21■■□□□ 1.47
CHRDQ9H2X0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.21■■□□□ 1.47
CHRDQ9H2X0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC24.21■■□□□ 1.47
CHRDQ9H2X0 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.21■■□□□ 1.47
CHRDQ9H2X0 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.47
CHRDQ9H2X0 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC24.2■■□□□ 1.47
CHRDQ9H2X0 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.2■■□□□ 1.47
CHRDQ9H2X0 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CHRDQ9H2X0 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CHRDQ9H2X0 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC24.2■■□□□ 1.46
CHRDQ9H2X0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHRDQ9H2X0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CHRDQ9H2X0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.2■■□□□ 1.46
CHRDQ9H2X0 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHRDQ9H2X0 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHRDQ9H2X0 AC011551.1-201ENST00000614101 683 ntBASIC24.19■■□□□ 1.46
CHRDQ9H2X0 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
CHRDQ9H2X0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHRDQ9H2X0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHRDQ9H2X0 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHRDQ9H2X0 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
CHRDQ9H2X0 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHRDQ9H2X0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.18■■□□□ 1.46
CHRDQ9H2X0 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHRDQ9H2X0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.18■■□□□ 1.46
CHRDQ9H2X0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC24.18■■□□□ 1.46
CHRDQ9H2X0 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.18■■□□□ 1.46
CHRDQ9H2X0 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CHRDQ9H2X0 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CHRDQ9H2X0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.17■■□□□ 1.46
CHRDQ9H2X0 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CHRDQ9H2X0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.16■■□□□ 1.46
CHRDQ9H2X0 AL512631.2-201ENST00000604634 923 ntBASIC24.16■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms