Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC24.91■■□□□ 1.58
CDK5RAP1Q96SZ6 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CDK5RAP1Q96SZ6 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
CDK5RAP1Q96SZ6 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CDK5RAP1Q96SZ6 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CDK5RAP1Q96SZ6 AC103834.1-201ENST00000520383 144 ntBASIC24.9■■□□□ 1.58
CDK5RAP1Q96SZ6 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
CDK5RAP1Q96SZ6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.89■■□□□ 1.58
CDK5RAP1Q96SZ6 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CDK5RAP1Q96SZ6 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC24.89■■□□□ 1.58
CDK5RAP1Q96SZ6 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
CDK5RAP1Q96SZ6 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC24.89■■□□□ 1.57
CDK5RAP1Q96SZ6 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CDK5RAP1Q96SZ6 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.57
CDK5RAP1Q96SZ6 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
CDK5RAP1Q96SZ6 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDK5RAP1Q96SZ6 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDK5RAP1Q96SZ6 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDK5RAP1Q96SZ6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC24.88■■□□□ 1.57
CDK5RAP1Q96SZ6 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC24.88■■□□□ 1.57
CDK5RAP1Q96SZ6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDK5RAP1Q96SZ6 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.88■■□□□ 1.57
CDK5RAP1Q96SZ6 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
CDK5RAP1Q96SZ6 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC24.87■■□□□ 1.57
CDK5RAP1Q96SZ6 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CDK5RAP1Q96SZ6 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.87■■□□□ 1.57
CDK5RAP1Q96SZ6 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.86■■□□□ 1.57
CDK5RAP1Q96SZ6 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CDK5RAP1Q96SZ6 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
CDK5RAP1Q96SZ6 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.86■■□□□ 1.57
CDK5RAP1Q96SZ6 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CDK5RAP1Q96SZ6 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CDK5RAP1Q96SZ6 AC010501.1-201ENST00000606270 1962 ntBASIC24.85■■□□□ 1.57
CDK5RAP1Q96SZ6 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
CDK5RAP1Q96SZ6 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
CDK5RAP1Q96SZ6 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC24.85■■□□□ 1.57
CDK5RAP1Q96SZ6 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.85■■□□□ 1.57
CDK5RAP1Q96SZ6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CDK5RAP1Q96SZ6 AC092803.2-201ENST00000564287 1899 ntBASIC24.85■■□□□ 1.57
CDK5RAP1Q96SZ6 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CDK5RAP1Q96SZ6 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CDK5RAP1Q96SZ6 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC24.84■■□□□ 1.57
CDK5RAP1Q96SZ6 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
CDK5RAP1Q96SZ6 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
CDK5RAP1Q96SZ6 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
CDK5RAP1Q96SZ6 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
CDK5RAP1Q96SZ6 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
CDK5RAP1Q96SZ6 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
CDK5RAP1Q96SZ6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
CDK5RAP1Q96SZ6 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.83■■□□□ 1.56
CDK5RAP1Q96SZ6 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
CDK5RAP1Q96SZ6 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CDK5RAP1Q96SZ6 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CDK5RAP1Q96SZ6 AL592295.1-201ENST00000400984 884 ntBASIC24.82■■□□□ 1.56
CDK5RAP1Q96SZ6 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC24.82■■□□□ 1.56
CDK5RAP1Q96SZ6 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
CDK5RAP1Q96SZ6 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CDK5RAP1Q96SZ6 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
CDK5RAP1Q96SZ6 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
CDK5RAP1Q96SZ6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC24.81■■□□□ 1.56
CDK5RAP1Q96SZ6 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC24.81■■□□□ 1.56
CDK5RAP1Q96SZ6 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CDK5RAP1Q96SZ6 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CDK5RAP1Q96SZ6 AC103724.3-201ENST00000564481 992 ntBASIC24.8■■□□□ 1.56
CDK5RAP1Q96SZ6 AL031848.2-201ENST00000607670 837 ntBASIC24.8■■□□□ 1.56
CDK5RAP1Q96SZ6 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CDK5RAP1Q96SZ6 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
CDK5RAP1Q96SZ6 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.8■■□□□ 1.56
CDK5RAP1Q96SZ6 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC24.8■■□□□ 1.56
CDK5RAP1Q96SZ6 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CDK5RAP1Q96SZ6 ERN1-208ENST00000606895 2068 ntBASIC24.79■■□□□ 1.56
CDK5RAP1Q96SZ6 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
CDK5RAP1Q96SZ6 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC24.79■■□□□ 1.56
CDK5RAP1Q96SZ6 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.79■■□□□ 1.56
CDK5RAP1Q96SZ6 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CDK5RAP1Q96SZ6 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CDK5RAP1Q96SZ6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CDK5RAP1Q96SZ6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CDK5RAP1Q96SZ6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.79■■□□□ 1.56
CDK5RAP1Q96SZ6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
CDK5RAP1Q96SZ6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
CDK5RAP1Q96SZ6 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
CDK5RAP1Q96SZ6 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
CDK5RAP1Q96SZ6 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CDK5RAP1Q96SZ6 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
CDK5RAP1Q96SZ6 AL451085.2-201ENST00000605085 799 ntBASIC24.78■■□□□ 1.56
CDK5RAP1Q96SZ6 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CDK5RAP1Q96SZ6 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
CDK5RAP1Q96SZ6 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CDK5RAP1Q96SZ6 AC096887.2-201ENST00000623443 1957 ntBASIC24.78■■□□□ 1.56
CDK5RAP1Q96SZ6 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC24.77■■□□□ 1.56
CDK5RAP1Q96SZ6 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.77■■□□□ 1.56
CDK5RAP1Q96SZ6 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
CDK5RAP1Q96SZ6 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CDK5RAP1Q96SZ6 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC24.77■■□□□ 1.56
CDK5RAP1Q96SZ6 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC24.77■■□□□ 1.56
CDK5RAP1Q96SZ6 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CDK5RAP1Q96SZ6 AC097639.1-201ENST00000565519 1891 ntBASIC24.77■■□□□ 1.56
CDK5RAP1Q96SZ6 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CDK5RAP1Q96SZ6 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms