Protein–RNA interactions for Protein: Q96RT7

TUBGCP6, Gamma-tubulin complex component 6, humanhuman

Predictions only

Length 1,819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP6Q96RT7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC31.14■■■□□ 2.58
TUBGCP6Q96RT7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC31.14■■■□□ 2.58
TUBGCP6Q96RT7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC31.14■■■□□ 2.57
TUBGCP6Q96RT7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC31.13■■■□□ 2.57
TUBGCP6Q96RT7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
TUBGCP6Q96RT7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC31.13■■■□□ 2.57
TUBGCP6Q96RT7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
TUBGCP6Q96RT7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
TUBGCP6Q96RT7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC31.13■■■□□ 2.57
TUBGCP6Q96RT7 LINC01003-201ENST00000564834 1764 ntBASIC31.13■■■□□ 2.57
TUBGCP6Q96RT7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
TUBGCP6Q96RT7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
TUBGCP6Q96RT7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC31.12■■■□□ 2.57
TUBGCP6Q96RT7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
TUBGCP6Q96RT7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
TUBGCP6Q96RT7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC31.12■■■□□ 2.57
TUBGCP6Q96RT7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC31.12■■■□□ 2.57
TUBGCP6Q96RT7 MIR4466-201ENST00000606121 54 ntBASIC31.12■■■□□ 2.57
TUBGCP6Q96RT7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
TUBGCP6Q96RT7 MIR4281-201ENST00000580852 62 ntBASIC31.11■■■□□ 2.57
TUBGCP6Q96RT7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
TUBGCP6Q96RT7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC31.11■■■□□ 2.57
TUBGCP6Q96RT7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC31.1■■■□□ 2.57
TUBGCP6Q96RT7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
TUBGCP6Q96RT7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC31.1■■■□□ 2.57
TUBGCP6Q96RT7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC31.1■■■□□ 2.57
TUBGCP6Q96RT7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
TUBGCP6Q96RT7 BX255925.1-201ENST00000566954 1854 ntBASIC31.09■■■□□ 2.57
TUBGCP6Q96RT7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
TUBGCP6Q96RT7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
TUBGCP6Q96RT7 KRT18P24-201ENST00000344739 1156 ntBASIC31.08■■■□□ 2.57
TUBGCP6Q96RT7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
TUBGCP6Q96RT7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC31.08■■■□□ 2.57
TUBGCP6Q96RT7 AL512631.2-201ENST00000604634 923 ntBASIC31.08■■■□□ 2.57
TUBGCP6Q96RT7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
TUBGCP6Q96RT7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC31.08■■■□□ 2.57
TUBGCP6Q96RT7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
TUBGCP6Q96RT7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
TUBGCP6Q96RT7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC31.07■■■□□ 2.56
TUBGCP6Q96RT7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
TUBGCP6Q96RT7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC31.07■■■□□ 2.56
TUBGCP6Q96RT7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC31.07■■■□□ 2.56
TUBGCP6Q96RT7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC31.07■■■□□ 2.56
TUBGCP6Q96RT7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
TUBGCP6Q96RT7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
TUBGCP6Q96RT7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
TUBGCP6Q96RT7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
TUBGCP6Q96RT7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC31.06■■■□□ 2.56
TUBGCP6Q96RT7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
TUBGCP6Q96RT7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
TUBGCP6Q96RT7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
TUBGCP6Q96RT7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC31.05■■■□□ 2.56
TUBGCP6Q96RT7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
TUBGCP6Q96RT7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
TUBGCP6Q96RT7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC31.04■■■□□ 2.56
TUBGCP6Q96RT7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC31.04■■■□□ 2.56
TUBGCP6Q96RT7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC31.04■■■□□ 2.56
TUBGCP6Q96RT7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC31.03■■■□□ 2.56
TUBGCP6Q96RT7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
TUBGCP6Q96RT7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC31.03■■■□□ 2.56
TUBGCP6Q96RT7 AC096631.2-201ENST00000436136 790 ntBASIC31.03■■■□□ 2.56
TUBGCP6Q96RT7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC31.03■■■□□ 2.56
TUBGCP6Q96RT7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
TUBGCP6Q96RT7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
TUBGCP6Q96RT7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
TUBGCP6Q96RT7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
TUBGCP6Q96RT7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC31.03■■■□□ 2.56
TUBGCP6Q96RT7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
TUBGCP6Q96RT7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
TUBGCP6Q96RT7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
TUBGCP6Q96RT7 ZNRF2P3-201ENST00000424200 374 ntBASIC31.02■■■□□ 2.56
TUBGCP6Q96RT7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC31.02■■■□□ 2.56
TUBGCP6Q96RT7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC31.02■■■□□ 2.56
TUBGCP6Q96RT7 AC092028.1-203ENST00000608262 953 ntBASIC31.02■■■□□ 2.56
TUBGCP6Q96RT7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
TUBGCP6Q96RT7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
TUBGCP6Q96RT7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
TUBGCP6Q96RT7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC31.01■■■□□ 2.55
TUBGCP6Q96RT7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
TUBGCP6Q96RT7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
TUBGCP6Q96RT7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
TUBGCP6Q96RT7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
TUBGCP6Q96RT7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC31■■■□□ 2.55
TUBGCP6Q96RT7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC30.99■■■□□ 2.55
TUBGCP6Q96RT7 AC026271.2-201ENST00000428091 497 ntBASIC30.98■■■□□ 2.55
TUBGCP6Q96RT7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC30.98■■■□□ 2.55
TUBGCP6Q96RT7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
TUBGCP6Q96RT7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC30.98■■■□□ 2.55
TUBGCP6Q96RT7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC30.98■■■□□ 2.55
TUBGCP6Q96RT7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC30.98■■■□□ 2.55
TUBGCP6Q96RT7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC30.98■■■□□ 2.55
TUBGCP6Q96RT7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC30.97■■■□□ 2.55
TUBGCP6Q96RT7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC30.96■■■□□ 2.55
TUBGCP6Q96RT7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
TUBGCP6Q96RT7 AC120024.1-201ENST00000562672 995 ntBASIC30.96■■■□□ 2.55
TUBGCP6Q96RT7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
TUBGCP6Q96RT7 MIR3621-201ENST00000580529 85 ntBASIC30.96■■■□□ 2.55
TUBGCP6Q96RT7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
TUBGCP6Q96RT7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
TUBGCP6Q96RT7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms