Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.96■□□□□ 0.95
RFT1Q96AA3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.96■□□□□ 0.95
RFT1Q96AA3 ZNRF2P2-203ENST00000454624 420 ntBASIC20.96■□□□□ 0.95
RFT1Q96AA3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RFT1Q96AA3 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFT1Q96AA3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFT1Q96AA3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RFT1Q96AA3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFT1Q96AA3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RFT1Q96AA3 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.95■□□□□ 0.94
RFT1Q96AA3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.95■□□□□ 0.94
RFT1Q96AA3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.95■□□□□ 0.94
RFT1Q96AA3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RFT1Q96AA3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
RFT1Q96AA3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RFT1Q96AA3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFT1Q96AA3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFT1Q96AA3 HLA-V-202ENST00000446817 847 ntBASIC20.94■□□□□ 0.94
RFT1Q96AA3 AC008813.1-201ENST00000536597 885 ntBASIC20.94■□□□□ 0.94
RFT1Q96AA3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFT1Q96AA3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFT1Q96AA3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.93■□□□□ 0.94
RFT1Q96AA3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.93■□□□□ 0.94
RFT1Q96AA3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFT1Q96AA3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFT1Q96AA3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RFT1Q96AA3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
RFT1Q96AA3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.92■□□□□ 0.94
RFT1Q96AA3 LINC00543-201ENST00000567234 1845 ntBASIC20.92■□□□□ 0.94
RFT1Q96AA3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RFT1Q96AA3 AC079834.2-201ENST00000609776 1949 ntBASIC20.92■□□□□ 0.94
RFT1Q96AA3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFT1Q96AA3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RFT1Q96AA3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RFT1Q96AA3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.92■□□□□ 0.94
RFT1Q96AA3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFT1Q96AA3 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFT1Q96AA3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFT1Q96AA3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
RFT1Q96AA3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFT1Q96AA3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFT1Q96AA3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
RFT1Q96AA3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.91■□□□□ 0.94
RFT1Q96AA3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFT1Q96AA3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.91■□□□□ 0.94
RFT1Q96AA3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.91■□□□□ 0.94
RFT1Q96AA3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.9■□□□□ 0.94
RFT1Q96AA3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFT1Q96AA3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFT1Q96AA3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.9■□□□□ 0.94
RFT1Q96AA3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFT1Q96AA3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.9■□□□□ 0.94
RFT1Q96AA3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFT1Q96AA3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.89■□□□□ 0.93
RFT1Q96AA3 AC148477.6-201ENST00000623746 465 ntBASIC20.89■□□□□ 0.93
RFT1Q96AA3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RFT1Q96AA3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFT1Q96AA3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.89■□□□□ 0.93
RFT1Q96AA3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFT1Q96AA3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.88■□□□□ 0.93
RFT1Q96AA3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFT1Q96AA3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFT1Q96AA3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.88■□□□□ 0.93
RFT1Q96AA3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFT1Q96AA3 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFT1Q96AA3 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFT1Q96AA3 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFT1Q96AA3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.88■□□□□ 0.93
RFT1Q96AA3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.88■□□□□ 0.93
RFT1Q96AA3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RFT1Q96AA3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RFT1Q96AA3 AL359258.2-201ENST00000564063 1566 ntBASIC20.87■□□□□ 0.93
RFT1Q96AA3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RFT1Q96AA3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
RFT1Q96AA3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
RFT1Q96AA3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFT1Q96AA3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RFT1Q96AA3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
RFT1Q96AA3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFT1Q96AA3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.86■□□□□ 0.93
RFT1Q96AA3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.86■□□□□ 0.93
RFT1Q96AA3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.86■□□□□ 0.93
RFT1Q96AA3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RFT1Q96AA3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.86■□□□□ 0.93
RFT1Q96AA3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RFT1Q96AA3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFT1Q96AA3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFT1Q96AA3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.86■□□□□ 0.93
RFT1Q96AA3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFT1Q96AA3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFT1Q96AA3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFT1Q96AA3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RFT1Q96AA3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.85■□□□□ 0.93
RFT1Q96AA3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
RFT1Q96AA3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.85■□□□□ 0.93
RFT1Q96AA3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFT1Q96AA3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.85■□□□□ 0.93
RFT1Q96AA3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.85■□□□□ 0.93
RFT1Q96AA3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.85■□□□□ 0.93
RFT1Q96AA3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms