Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RAB40AQ8WXH6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB40AQ8WXH6 MIR219A2-201ENST00000608502 1504 ntBASIC20.85■□□□□ 0.93
RAB40AQ8WXH6 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAB40AQ8WXH6 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.85■□□□□ 0.93
RAB40AQ8WXH6 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB40AQ8WXH6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
RAB40AQ8WXH6 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB40AQ8WXH6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.85■□□□□ 0.93
RAB40AQ8WXH6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.85■□□□□ 0.93
RAB40AQ8WXH6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB40AQ8WXH6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB40AQ8WXH6 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAB40AQ8WXH6 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAB40AQ8WXH6 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.84■□□□□ 0.93
RAB40AQ8WXH6 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAB40AQ8WXH6 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB40AQ8WXH6 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
RAB40AQ8WXH6 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAB40AQ8WXH6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB40AQ8WXH6 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAB40AQ8WXH6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAB40AQ8WXH6 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAB40AQ8WXH6 AC022413.1-201ENST00000624602 984 ntBASIC20.83■□□□□ 0.93
RAB40AQ8WXH6 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.83■□□□□ 0.92
RAB40AQ8WXH6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
RAB40AQ8WXH6 AC012676.1-201ENST00000574705 1949 ntBASIC20.82■□□□□ 0.92
RAB40AQ8WXH6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB40AQ8WXH6 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.82■□□□□ 0.92
RAB40AQ8WXH6 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RAB40AQ8WXH6 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB40AQ8WXH6 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
RAB40AQ8WXH6 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.81■□□□□ 0.92
RAB40AQ8WXH6 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB40AQ8WXH6 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RAB40AQ8WXH6 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB40AQ8WXH6 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB40AQ8WXH6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
RAB40AQ8WXH6 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
RAB40AQ8WXH6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
RAB40AQ8WXH6 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB40AQ8WXH6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB40AQ8WXH6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAB40AQ8WXH6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAB40AQ8WXH6 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB40AQ8WXH6 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB40AQ8WXH6 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB40AQ8WXH6 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.79■□□□□ 0.92
RAB40AQ8WXH6 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.79■□□□□ 0.92
RAB40AQ8WXH6 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.79■□□□□ 0.92
RAB40AQ8WXH6 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.79■□□□□ 0.92
RAB40AQ8WXH6 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RAB40AQ8WXH6 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB40AQ8WXH6 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB40AQ8WXH6 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB40AQ8WXH6 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.78■□□□□ 0.92
RAB40AQ8WXH6 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.78■□□□□ 0.92
RAB40AQ8WXH6 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB40AQ8WXH6 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB40AQ8WXH6 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.78■□□□□ 0.92
RAB40AQ8WXH6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB40AQ8WXH6 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RAB40AQ8WXH6 RNF126P1-201ENST00000567452 1320 ntBASIC20.78■□□□□ 0.92
RAB40AQ8WXH6 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB40AQ8WXH6 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB40AQ8WXH6 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB40AQ8WXH6 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB40AQ8WXH6 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAB40AQ8WXH6 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAB40AQ8WXH6 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAB40AQ8WXH6 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.77■□□□□ 0.92
RAB40AQ8WXH6 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAB40AQ8WXH6 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB40AQ8WXH6 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB40AQ8WXH6 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAB40AQ8WXH6 AC096887.2-201ENST00000623443 1957 ntBASIC20.76■□□□□ 0.91
RAB40AQ8WXH6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB40AQ8WXH6 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAB40AQ8WXH6 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAB40AQ8WXH6 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB40AQ8WXH6 RARRES2P2-201ENST00000394842 485 ntBASIC20.75■□□□□ 0.91
RAB40AQ8WXH6 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAB40AQ8WXH6 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.75■□□□□ 0.91
RAB40AQ8WXH6 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB40AQ8WXH6 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB40AQ8WXH6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB40AQ8WXH6 AP003733.4-201ENST00000623785 1697 ntBASIC20.74■□□□□ 0.91
RAB40AQ8WXH6 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB40AQ8WXH6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RAB40AQ8WXH6 AC126177.7-201ENST00000547904 679 ntBASIC20.74■□□□□ 0.91
RAB40AQ8WXH6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
RAB40AQ8WXH6 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.74■□□□□ 0.91
RAB40AQ8WXH6 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.74■□□□□ 0.91
RAB40AQ8WXH6 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB40AQ8WXH6 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB40AQ8WXH6 AC133561.1-201ENST00000568600 2415 ntBASIC20.74■□□□□ 0.91
RAB40AQ8WXH6 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB40AQ8WXH6 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB40AQ8WXH6 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB40AQ8WXH6 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms