Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.09■■□□□ 1.61
RNF139Q8WU17 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.09■■□□□ 1.61
RNF139Q8WU17 ERN1-208ENST00000606895 2068 ntBASIC25.09■■□□□ 1.61
RNF139Q8WU17 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
RNF139Q8WU17 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RNF139Q8WU17 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RNF139Q8WU17 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.08■■□□□ 1.61
RNF139Q8WU17 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
RNF139Q8WU17 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RNF139Q8WU17 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC25.08■■□□□ 1.61
RNF139Q8WU17 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RNF139Q8WU17 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
RNF139Q8WU17 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
RNF139Q8WU17 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.08■■□□□ 1.6
RNF139Q8WU17 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RNF139Q8WU17 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RNF139Q8WU17 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
RNF139Q8WU17 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RNF139Q8WU17 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RNF139Q8WU17 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC25.07■■□□□ 1.6
RNF139Q8WU17 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.07■■□□□ 1.6
RNF139Q8WU17 RPS2P7-201ENST00000447334 885 ntBASIC25.06■■□□□ 1.6
RNF139Q8WU17 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC25.06■■□□□ 1.6
RNF139Q8WU17 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RNF139Q8WU17 AC074183.2-201ENST00000623112 922 ntBASIC25.06■■□□□ 1.6
RNF139Q8WU17 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
RNF139Q8WU17 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RNF139Q8WU17 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RNF139Q8WU17 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
RNF139Q8WU17 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RNF139Q8WU17 AC087393.1-201ENST00000582896 145 ntBASIC25.04■■□□□ 1.6
RNF139Q8WU17 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.04■■□□□ 1.6
RNF139Q8WU17 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF139Q8WU17 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF139Q8WU17 AC010501.1-201ENST00000606270 1962 ntBASIC25.04■■□□□ 1.6
RNF139Q8WU17 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC25.03■■□□□ 1.6
RNF139Q8WU17 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.03■■□□□ 1.6
RNF139Q8WU17 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
RNF139Q8WU17 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC25.03■■□□□ 1.6
RNF139Q8WU17 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF139Q8WU17 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF139Q8WU17 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF139Q8WU17 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF139Q8WU17 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF139Q8WU17 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RNF139Q8WU17 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.02■■□□□ 1.6
RNF139Q8WU17 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.02■■□□□ 1.6
RNF139Q8WU17 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RNF139Q8WU17 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.02■■□□□ 1.6
RNF139Q8WU17 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.6
RNF139Q8WU17 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.01■■□□□ 1.59
RNF139Q8WU17 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
RNF139Q8WU17 AC010980.1-201ENST00000587192 1142 ntBASIC25.01■■□□□ 1.59
RNF139Q8WU17 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.01■■□□□ 1.59
RNF139Q8WU17 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.01■■□□□ 1.59
RNF139Q8WU17 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25■■□□□ 1.59
RNF139Q8WU17 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25■■□□□ 1.59
RNF139Q8WU17 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC25■■□□□ 1.59
RNF139Q8WU17 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RNF139Q8WU17 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
RNF139Q8WU17 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RNF139Q8WU17 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RNF139Q8WU17 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
RNF139Q8WU17 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RNF139Q8WU17 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
RNF139Q8WU17 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RNF139Q8WU17 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RNF139Q8WU17 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RNF139Q8WU17 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
RNF139Q8WU17 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.97■■□□□ 1.59
RNF139Q8WU17 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RNF139Q8WU17 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.96■■□□□ 1.59
RNF139Q8WU17 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RNF139Q8WU17 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RNF139Q8WU17 MTX2-204ENST00000443241 799 ntTSL 3 BASIC24.96■■□□□ 1.59
RNF139Q8WU17 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC24.96■■□□□ 1.59
RNF139Q8WU17 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.96■■□□□ 1.59
RNF139Q8WU17 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.96■■□□□ 1.59
RNF139Q8WU17 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RNF139Q8WU17 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.96■■□□□ 1.59
RNF139Q8WU17 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RNF139Q8WU17 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC24.95■■□□□ 1.59
RNF139Q8WU17 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC24.95■■□□□ 1.59
RNF139Q8WU17 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RNF139Q8WU17 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.95■■□□□ 1.58
RNF139Q8WU17 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC24.95■■□□□ 1.58
RNF139Q8WU17 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.95■■□□□ 1.58
RNF139Q8WU17 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
RNF139Q8WU17 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
RNF139Q8WU17 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RNF139Q8WU17 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
RNF139Q8WU17 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RNF139Q8WU17 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
RNF139Q8WU17 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
RNF139Q8WU17 AC096887.2-201ENST00000623443 1957 ntBASIC24.94■■□□□ 1.58
RNF139Q8WU17 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
RNF139Q8WU17 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC24.94■■□□□ 1.58
RNF139Q8WU17 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.94■■□□□ 1.58
RNF139Q8WU17 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC24.94■■□□□ 1.58
RNF139Q8WU17 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms