Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
BBS1Q8NFJ9 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
BBS1Q8NFJ9 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
BBS1Q8NFJ9 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
BBS1Q8NFJ9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
BBS1Q8NFJ9 SLC6A10P-202ENST00000431994 2058 ntBASIC21.43■■□□□ 1.02
BBS1Q8NFJ9 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
BBS1Q8NFJ9 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
BBS1Q8NFJ9 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
BBS1Q8NFJ9 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.42■■□□□ 1.02
BBS1Q8NFJ9 AC097639.1-201ENST00000565519 1891 ntBASIC21.42■■□□□ 1.02
BBS1Q8NFJ9 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.42■■□□□ 1.02
BBS1Q8NFJ9 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
BBS1Q8NFJ9 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
BBS1Q8NFJ9 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BBS1Q8NFJ9 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BBS1Q8NFJ9 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.41■■□□□ 1.02
BBS1Q8NFJ9 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
BBS1Q8NFJ9 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
BBS1Q8NFJ9 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BBS1Q8NFJ9 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BBS1Q8NFJ9 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BBS1Q8NFJ9 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BBS1Q8NFJ9 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.41■■□□□ 1.02
BBS1Q8NFJ9 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
BBS1Q8NFJ9 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BBS1Q8NFJ9 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
BBS1Q8NFJ9 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
BBS1Q8NFJ9 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
BBS1Q8NFJ9 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
BBS1Q8NFJ9 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.4■■□□□ 1.02
BBS1Q8NFJ9 CR559946.2-201ENST00000623684 991 ntBASIC21.4■■□□□ 1.02
BBS1Q8NFJ9 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BBS1Q8NFJ9 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
BBS1Q8NFJ9 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BBS1Q8NFJ9 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
BBS1Q8NFJ9 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BBS1Q8NFJ9 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
BBS1Q8NFJ9 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
BBS1Q8NFJ9 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
BBS1Q8NFJ9 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.39■■□□□ 1.02
BBS1Q8NFJ9 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.39■■□□□ 1.02
BBS1Q8NFJ9 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
BBS1Q8NFJ9 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.39■■□□□ 1.01
BBS1Q8NFJ9 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
BBS1Q8NFJ9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.39■■□□□ 1.01
BBS1Q8NFJ9 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
BBS1Q8NFJ9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
BBS1Q8NFJ9 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.39■■□□□ 1.01
BBS1Q8NFJ9 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
BBS1Q8NFJ9 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
BBS1Q8NFJ9 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
BBS1Q8NFJ9 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
BBS1Q8NFJ9 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
BBS1Q8NFJ9 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.38■■□□□ 1.01
BBS1Q8NFJ9 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.38■■□□□ 1.01
BBS1Q8NFJ9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.38■■□□□ 1.01
BBS1Q8NFJ9 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
BBS1Q8NFJ9 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
BBS1Q8NFJ9 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.38■■□□□ 1.01
BBS1Q8NFJ9 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
BBS1Q8NFJ9 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.38■■□□□ 1.01
BBS1Q8NFJ9 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
BBS1Q8NFJ9 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
BBS1Q8NFJ9 AP003733.4-201ENST00000623785 1697 ntBASIC21.37■■□□□ 1.01
BBS1Q8NFJ9 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BBS1Q8NFJ9 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BBS1Q8NFJ9 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
BBS1Q8NFJ9 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BBS1Q8NFJ9 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
BBS1Q8NFJ9 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.37■■□□□ 1.01
BBS1Q8NFJ9 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BBS1Q8NFJ9 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
BBS1Q8NFJ9 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BBS1Q8NFJ9 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.36■■□□□ 1.01
BBS1Q8NFJ9 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
BBS1Q8NFJ9 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
BBS1Q8NFJ9 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
BBS1Q8NFJ9 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BBS1Q8NFJ9 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
BBS1Q8NFJ9 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.36■■□□□ 1.01
BBS1Q8NFJ9 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
BBS1Q8NFJ9 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.35■■□□□ 1.01
BBS1Q8NFJ9 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
BBS1Q8NFJ9 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
BBS1Q8NFJ9 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
BBS1Q8NFJ9 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
BBS1Q8NFJ9 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
BBS1Q8NFJ9 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
BBS1Q8NFJ9 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
BBS1Q8NFJ9 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.34■■□□□ 1.01
BBS1Q8NFJ9 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
BBS1Q8NFJ9 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
BBS1Q8NFJ9 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
BBS1Q8NFJ9 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
BBS1Q8NFJ9 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.33■■□□□ 1.01
BBS1Q8NFJ9 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
BBS1Q8NFJ9 AC126177.7-201ENST00000547904 679 ntBASIC21.33■■□□□ 1.01
BBS1Q8NFJ9 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.33■■□□□ 1
BBS1Q8NFJ9 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms