Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
HIPK4Q8NE63 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
HIPK4Q8NE63 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
HIPK4Q8NE63 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
HIPK4Q8NE63 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
HIPK4Q8NE63 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
HIPK4Q8NE63 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
HIPK4Q8NE63 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
HIPK4Q8NE63 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
HIPK4Q8NE63 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
HIPK4Q8NE63 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.92■■□□□ 1.26
HIPK4Q8NE63 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.92■■□□□ 1.26
HIPK4Q8NE63 AC096887.2-201ENST00000623443 1957 ntBASIC22.92■■□□□ 1.26
HIPK4Q8NE63 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
HIPK4Q8NE63 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
HIPK4Q8NE63 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
HIPK4Q8NE63 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
HIPK4Q8NE63 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
HIPK4Q8NE63 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.91■■□□□ 1.26
HIPK4Q8NE63 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
HIPK4Q8NE63 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
HIPK4Q8NE63 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
HIPK4Q8NE63 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
HIPK4Q8NE63 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
HIPK4Q8NE63 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
HIPK4Q8NE63 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
HIPK4Q8NE63 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
HIPK4Q8NE63 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
HIPK4Q8NE63 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
HIPK4Q8NE63 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
HIPK4Q8NE63 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
HIPK4Q8NE63 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
HIPK4Q8NE63 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.89■■□□□ 1.25
HIPK4Q8NE63 LINC01971-201ENST00000617888 1048 ntBASIC22.89■■□□□ 1.25
HIPK4Q8NE63 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
HIPK4Q8NE63 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC22.89■■□□□ 1.25
HIPK4Q8NE63 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
HIPK4Q8NE63 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.89■■□□□ 1.25
HIPK4Q8NE63 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
HIPK4Q8NE63 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.89■■□□□ 1.25
HIPK4Q8NE63 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
HIPK4Q8NE63 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
HIPK4Q8NE63 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
HIPK4Q8NE63 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
HIPK4Q8NE63 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
HIPK4Q8NE63 HGH1-207ENST00000628266 258 ntTSL 5 BASIC22.88■■□□□ 1.25
HIPK4Q8NE63 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
HIPK4Q8NE63 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.88■■□□□ 1.25
HIPK4Q8NE63 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
HIPK4Q8NE63 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.87■■□□□ 1.25
HIPK4Q8NE63 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
HIPK4Q8NE63 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
HIPK4Q8NE63 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC22.87■■□□□ 1.25
HIPK4Q8NE63 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
HIPK4Q8NE63 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.87■■□□□ 1.25
HIPK4Q8NE63 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
HIPK4Q8NE63 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.86■■□□□ 1.25
HIPK4Q8NE63 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
HIPK4Q8NE63 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.86■■□□□ 1.25
HIPK4Q8NE63 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
HIPK4Q8NE63 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
HIPK4Q8NE63 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.85■■□□□ 1.25
HIPK4Q8NE63 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
HIPK4Q8NE63 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.85■■□□□ 1.25
HIPK4Q8NE63 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
HIPK4Q8NE63 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.85■■□□□ 1.25
HIPK4Q8NE63 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.85■■□□□ 1.25
HIPK4Q8NE63 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.85■■□□□ 1.25
HIPK4Q8NE63 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
HIPK4Q8NE63 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.85■■□□□ 1.25
HIPK4Q8NE63 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
HIPK4Q8NE63 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
HIPK4Q8NE63 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.84■■□□□ 1.25
HIPK4Q8NE63 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.84■■□□□ 1.25
HIPK4Q8NE63 AC097639.1-201ENST00000565519 1891 ntBASIC22.84■■□□□ 1.25
HIPK4Q8NE63 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
HIPK4Q8NE63 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
HIPK4Q8NE63 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
HIPK4Q8NE63 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
HIPK4Q8NE63 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
HIPK4Q8NE63 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.83■■□□□ 1.25
HIPK4Q8NE63 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
HIPK4Q8NE63 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC22.83■■□□□ 1.25
HIPK4Q8NE63 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC22.83■■□□□ 1.25
HIPK4Q8NE63 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.24
HIPK4Q8NE63 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
HIPK4Q8NE63 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
HIPK4Q8NE63 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.82■■□□□ 1.24
HIPK4Q8NE63 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
HIPK4Q8NE63 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.82■■□□□ 1.24
HIPK4Q8NE63 DUX4L13-201ENST00000554103 1267 ntBASIC22.82■■□□□ 1.24
HIPK4Q8NE63 DUX4L15-201ENST00000611059 1267 ntBASIC22.82■■□□□ 1.24
HIPK4Q8NE63 DUX4L23-201ENST00000615195 1269 ntBASIC22.82■■□□□ 1.24
HIPK4Q8NE63 DUX4L24-201ENST00000617576 1269 ntBASIC22.82■■□□□ 1.24
HIPK4Q8NE63 DUX4L22-201ENST00000618238 1269 ntBASIC22.82■■□□□ 1.24
HIPK4Q8NE63 DUX4L20-201ENST00000619712 1269 ntBASIC22.82■■□□□ 1.24
HIPK4Q8NE63 DUX4L21-201ENST00000622058 1269 ntBASIC22.82■■□□□ 1.24
HIPK4Q8NE63 DUX4L10-201ENST00000622460 1267 ntBASIC22.82■■□□□ 1.24
HIPK4Q8NE63 DUX4L25-201ENST00000624915 1269 ntBASIC22.82■■□□□ 1.24
HIPK4Q8NE63 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms