Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 EDA-201ENST00000338901 1233 ntBASIC20.35■□□□□ 0.85
CCDC168Q8NDH2 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC168Q8NDH2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.35■□□□□ 0.85
CCDC168Q8NDH2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.35■□□□□ 0.85
CCDC168Q8NDH2 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC168Q8NDH2 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC168Q8NDH2 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CCDC168Q8NDH2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC168Q8NDH2 AC105265.2-201ENST00000467189 838 ntBASIC20.34■□□□□ 0.85
CCDC168Q8NDH2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC168Q8NDH2 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC168Q8NDH2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC168Q8NDH2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC168Q8NDH2 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC168Q8NDH2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CCDC168Q8NDH2 AF213884.3-201ENST00000563833 479 ntBASIC20.33■□□□□ 0.85
CCDC168Q8NDH2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.33■□□□□ 0.85
CCDC168Q8NDH2 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.33■□□□□ 0.85
CCDC168Q8NDH2 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.33■□□□□ 0.85
CCDC168Q8NDH2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.33■□□□□ 0.84
CCDC168Q8NDH2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.33■□□□□ 0.84
CCDC168Q8NDH2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC168Q8NDH2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CCDC168Q8NDH2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.32■□□□□ 0.84
CCDC168Q8NDH2 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC168Q8NDH2 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC168Q8NDH2 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.32■□□□□ 0.84
CCDC168Q8NDH2 AL355001.2-201ENST00000620617 1191 ntBASIC20.32■□□□□ 0.84
CCDC168Q8NDH2 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC168Q8NDH2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC168Q8NDH2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CCDC168Q8NDH2 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC168Q8NDH2 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CCDC168Q8NDH2 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC168Q8NDH2 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC168Q8NDH2 KRT18P10-201ENST00000388836 1287 ntBASIC20.3■□□□□ 0.84
CCDC168Q8NDH2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC168Q8NDH2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC168Q8NDH2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC168Q8NDH2 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC168Q8NDH2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CCDC168Q8NDH2 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC168Q8NDH2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC168Q8NDH2 AL139393.2-201ENST00000608721 2025 ntBASIC20.3■□□□□ 0.84
CCDC168Q8NDH2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC168Q8NDH2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC168Q8NDH2 AC024257.2-201ENST00000549699 147 ntBASIC20.29■□□□□ 0.84
CCDC168Q8NDH2 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC168Q8NDH2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC168Q8NDH2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
CCDC168Q8NDH2 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC168Q8NDH2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CCDC168Q8NDH2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC168Q8NDH2 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC168Q8NDH2 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC168Q8NDH2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.28■□□□□ 0.84
CCDC168Q8NDH2 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC168Q8NDH2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC168Q8NDH2 AP002414.2-202ENST00000590929 1450 ntBASIC20.27■□□□□ 0.84
CCDC168Q8NDH2 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC168Q8NDH2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC168Q8NDH2 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC168Q8NDH2 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC168Q8NDH2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.26■□□□□ 0.83
CCDC168Q8NDH2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC168Q8NDH2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CCDC168Q8NDH2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC168Q8NDH2 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC168Q8NDH2 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CCDC168Q8NDH2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC168Q8NDH2 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC168Q8NDH2 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC168Q8NDH2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CCDC168Q8NDH2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC168Q8NDH2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC168Q8NDH2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC168Q8NDH2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC168Q8NDH2 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC168Q8NDH2 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CCDC168Q8NDH2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.24■□□□□ 0.83
CCDC168Q8NDH2 RARRES2P11-201ENST00000635158 484 ntBASIC20.24■□□□□ 0.83
CCDC168Q8NDH2 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC168Q8NDH2 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC168Q8NDH2 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CCDC168Q8NDH2 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CCDC168Q8NDH2 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.23■□□□□ 0.83
CCDC168Q8NDH2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC168Q8NDH2 UNC93B3-201ENST00000308076 687 ntBASIC20.22■□□□□ 0.83
CCDC168Q8NDH2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CCDC168Q8NDH2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC168Q8NDH2 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC168Q8NDH2 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC168Q8NDH2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
CCDC168Q8NDH2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC168Q8NDH2 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
CCDC168Q8NDH2 MIR939-201ENST00000401314 82 ntBASIC20.21■□□□□ 0.83
CCDC168Q8NDH2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC168Q8NDH2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC168Q8NDH2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC168Q8NDH2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms