Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PCDH20Q8N6Y1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PCDH20Q8N6Y1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.38■■□□□ 1.49
PCDH20Q8N6Y1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDH20Q8N6Y1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.38■■□□□ 1.49
PCDH20Q8N6Y1 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDH20Q8N6Y1 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDH20Q8N6Y1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDH20Q8N6Y1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDH20Q8N6Y1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC24.36■■□□□ 1.49
PCDH20Q8N6Y1 AC010980.1-201ENST00000587192 1142 ntBASIC24.36■■□□□ 1.49
PCDH20Q8N6Y1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
PCDH20Q8N6Y1 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.36■■□□□ 1.49
PCDH20Q8N6Y1 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.36■■□□□ 1.49
PCDH20Q8N6Y1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDH20Q8N6Y1 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.35■■□□□ 1.49
PCDH20Q8N6Y1 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
PCDH20Q8N6Y1 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC24.35■■□□□ 1.49
PCDH20Q8N6Y1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDH20Q8N6Y1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PCDH20Q8N6Y1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.33■■□□□ 1.49
PCDH20Q8N6Y1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC24.33■■□□□ 1.49
PCDH20Q8N6Y1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC24.33■■□□□ 1.49
PCDH20Q8N6Y1 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDH20Q8N6Y1 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDH20Q8N6Y1 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.33■■□□□ 1.49
PCDH20Q8N6Y1 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.33■■□□□ 1.48
PCDH20Q8N6Y1 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC24.33■■□□□ 1.48
PCDH20Q8N6Y1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
PCDH20Q8N6Y1 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.32■■□□□ 1.48
PCDH20Q8N6Y1 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDH20Q8N6Y1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDH20Q8N6Y1 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PCDH20Q8N6Y1 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.32■■□□□ 1.48
PCDH20Q8N6Y1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.32■■□□□ 1.48
PCDH20Q8N6Y1 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDH20Q8N6Y1 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDH20Q8N6Y1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDH20Q8N6Y1 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDH20Q8N6Y1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDH20Q8N6Y1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.31■■□□□ 1.48
PCDH20Q8N6Y1 AC019171.1-201ENST00000601251 1056 ntBASIC24.31■■□□□ 1.48
PCDH20Q8N6Y1 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
PCDH20Q8N6Y1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC24.31■■□□□ 1.48
PCDH20Q8N6Y1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PCDH20Q8N6Y1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PCDH20Q8N6Y1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PCDH20Q8N6Y1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDH20Q8N6Y1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PCDH20Q8N6Y1 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDH20Q8N6Y1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC24.29■■□□□ 1.48
PCDH20Q8N6Y1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDH20Q8N6Y1 RARRES2P1-201ENST00000474487 481 ntBASIC24.29■■□□□ 1.48
PCDH20Q8N6Y1 PVT1_1.1-201ENST00000615125 194 ntBASIC24.29■■□□□ 1.48
PCDH20Q8N6Y1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.29■■□□□ 1.48
PCDH20Q8N6Y1 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDH20Q8N6Y1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC24.29■■□□□ 1.48
PCDH20Q8N6Y1 LONRF2P2-201ENST00000439212 571 ntBASIC24.28■■□□□ 1.48
PCDH20Q8N6Y1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PCDH20Q8N6Y1 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDH20Q8N6Y1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDH20Q8N6Y1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDH20Q8N6Y1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC24.27■■□□□ 1.48
PCDH20Q8N6Y1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.27■■□□□ 1.48
PCDH20Q8N6Y1 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDH20Q8N6Y1 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDH20Q8N6Y1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
PCDH20Q8N6Y1 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PCDH20Q8N6Y1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC24.26■■□□□ 1.47
PCDH20Q8N6Y1 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24.26■■□□□ 1.47
PCDH20Q8N6Y1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC24.26■■□□□ 1.47
PCDH20Q8N6Y1 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC24.26■■□□□ 1.47
PCDH20Q8N6Y1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC24.26■■□□□ 1.47
PCDH20Q8N6Y1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PCDH20Q8N6Y1 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC24.25■■□□□ 1.47
PCDH20Q8N6Y1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.25■■□□□ 1.47
PCDH20Q8N6Y1 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDH20Q8N6Y1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PCDH20Q8N6Y1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.25■■□□□ 1.47
PCDH20Q8N6Y1 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDH20Q8N6Y1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDH20Q8N6Y1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC24.25■■□□□ 1.47
PCDH20Q8N6Y1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC24.25■■□□□ 1.47
PCDH20Q8N6Y1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDH20Q8N6Y1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDH20Q8N6Y1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.24■■□□□ 1.47
PCDH20Q8N6Y1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDH20Q8N6Y1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDH20Q8N6Y1 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDH20Q8N6Y1 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PCDH20Q8N6Y1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDH20Q8N6Y1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.24■■□□□ 1.47
PCDH20Q8N6Y1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.24■■□□□ 1.47
PCDH20Q8N6Y1 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PCDH20Q8N6Y1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDH20Q8N6Y1 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
PCDH20Q8N6Y1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDH20Q8N6Y1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.24■■□□□ 1.47
PCDH20Q8N6Y1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH20Q8N6Y1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms