Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.58■■□□□ 1.37
CPNE9Q8IYJ1 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CPNE9Q8IYJ1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CPNE9Q8IYJ1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CPNE9Q8IYJ1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CPNE9Q8IYJ1 AC026202.3-201ENST00000600805 1127 ntBASIC23.57■■□□□ 1.36
CPNE9Q8IYJ1 RAP2CP1-202ENST00000605179 643 ntBASIC23.57■■□□□ 1.36
CPNE9Q8IYJ1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CPNE9Q8IYJ1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.57■■□□□ 1.36
CPNE9Q8IYJ1 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CPNE9Q8IYJ1 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CPNE9Q8IYJ1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
CPNE9Q8IYJ1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.57■■□□□ 1.36
CPNE9Q8IYJ1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CPNE9Q8IYJ1 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.56■■□□□ 1.36
CPNE9Q8IYJ1 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CPNE9Q8IYJ1 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CPNE9Q8IYJ1 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.56■■□□□ 1.36
CPNE9Q8IYJ1 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CPNE9Q8IYJ1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CPNE9Q8IYJ1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CPNE9Q8IYJ1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
CPNE9Q8IYJ1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CPNE9Q8IYJ1 HSD17B1P1-201ENST00000590052 955 ntBASIC23.55■■□□□ 1.36
CPNE9Q8IYJ1 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CPNE9Q8IYJ1 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
CPNE9Q8IYJ1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.55■■□□□ 1.36
CPNE9Q8IYJ1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CPNE9Q8IYJ1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CPNE9Q8IYJ1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CPNE9Q8IYJ1 AC097639.1-201ENST00000565519 1891 ntBASIC23.54■■□□□ 1.36
CPNE9Q8IYJ1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CPNE9Q8IYJ1 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
CPNE9Q8IYJ1 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.54■■□□□ 1.36
CPNE9Q8IYJ1 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CPNE9Q8IYJ1 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CPNE9Q8IYJ1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CPNE9Q8IYJ1 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.53■■□□□ 1.36
CPNE9Q8IYJ1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CPNE9Q8IYJ1 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CPNE9Q8IYJ1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.53■■□□□ 1.36
CPNE9Q8IYJ1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CPNE9Q8IYJ1 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.53■■□□□ 1.36
CPNE9Q8IYJ1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.53■■□□□ 1.36
CPNE9Q8IYJ1 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CPNE9Q8IYJ1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CPNE9Q8IYJ1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.52■■□□□ 1.36
CPNE9Q8IYJ1 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CPNE9Q8IYJ1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.52■■□□□ 1.36
CPNE9Q8IYJ1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
CPNE9Q8IYJ1 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CPNE9Q8IYJ1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
CPNE9Q8IYJ1 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CPNE9Q8IYJ1 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CPNE9Q8IYJ1 AC009831.1-201ENST00000580420 1582 ntBASIC23.52■■□□□ 1.36
CPNE9Q8IYJ1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CPNE9Q8IYJ1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
CPNE9Q8IYJ1 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CPNE9Q8IYJ1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CPNE9Q8IYJ1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CPNE9Q8IYJ1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CPNE9Q8IYJ1 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CPNE9Q8IYJ1 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CPNE9Q8IYJ1 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.51■■□□□ 1.35
CPNE9Q8IYJ1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.51■■□□□ 1.35
CPNE9Q8IYJ1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CPNE9Q8IYJ1 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
CPNE9Q8IYJ1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.5■■□□□ 1.35
CPNE9Q8IYJ1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CPNE9Q8IYJ1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CPNE9Q8IYJ1 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CPNE9Q8IYJ1 RARRES2P2-201ENST00000394842 485 ntBASIC23.5■■□□□ 1.35
CPNE9Q8IYJ1 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.49■■□□□ 1.35
CPNE9Q8IYJ1 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CPNE9Q8IYJ1 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.49■■□□□ 1.35
CPNE9Q8IYJ1 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CPNE9Q8IYJ1 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CPNE9Q8IYJ1 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.48■■□□□ 1.35
CPNE9Q8IYJ1 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
CPNE9Q8IYJ1 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
CPNE9Q8IYJ1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.48■■□□□ 1.35
CPNE9Q8IYJ1 AC133552.2-201ENST00000619106 1032 ntBASIC23.48■■□□□ 1.35
CPNE9Q8IYJ1 AC022211.4-201ENST00000625094 2161 ntBASIC23.48■■□□□ 1.35
CPNE9Q8IYJ1 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CPNE9Q8IYJ1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
CPNE9Q8IYJ1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
CPNE9Q8IYJ1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CPNE9Q8IYJ1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.47■■□□□ 1.35
CPNE9Q8IYJ1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CPNE9Q8IYJ1 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.47■■□□□ 1.35
CPNE9Q8IYJ1 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CPNE9Q8IYJ1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
CPNE9Q8IYJ1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CPNE9Q8IYJ1 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CPNE9Q8IYJ1 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
CPNE9Q8IYJ1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.46■■□□□ 1.35
CPNE9Q8IYJ1 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CPNE9Q8IYJ1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CPNE9Q8IYJ1 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CPNE9Q8IYJ1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms