Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CCDC60Q8IWA6 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC26.79■■□□□ 1.88
CCDC60Q8IWA6 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.79■■□□□ 1.88
CCDC60Q8IWA6 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
CCDC60Q8IWA6 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC26.78■■□□□ 1.88
CCDC60Q8IWA6 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
CCDC60Q8IWA6 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CCDC60Q8IWA6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC60Q8IWA6 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC60Q8IWA6 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC60Q8IWA6 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.77■■□□□ 1.88
CCDC60Q8IWA6 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.76■■□□□ 1.87
CCDC60Q8IWA6 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
CCDC60Q8IWA6 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CCDC60Q8IWA6 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CCDC60Q8IWA6 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CCDC60Q8IWA6 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CCDC60Q8IWA6 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CCDC60Q8IWA6 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CCDC60Q8IWA6 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CCDC60Q8IWA6 ERN1-208ENST00000606895 2068 ntBASIC26.75■■□□□ 1.87
CCDC60Q8IWA6 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
CCDC60Q8IWA6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.75■■□□□ 1.87
CCDC60Q8IWA6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.75■■□□□ 1.87
CCDC60Q8IWA6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC26.75■■□□□ 1.87
CCDC60Q8IWA6 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
CCDC60Q8IWA6 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
CCDC60Q8IWA6 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
CCDC60Q8IWA6 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.75■■□□□ 1.87
CCDC60Q8IWA6 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CCDC60Q8IWA6 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CCDC60Q8IWA6 AC009299.2-201ENST00000482477 511 ntBASIC26.74■■□□□ 1.87
CCDC60Q8IWA6 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CCDC60Q8IWA6 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CCDC60Q8IWA6 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CCDC60Q8IWA6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CCDC60Q8IWA6 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CCDC60Q8IWA6 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CCDC60Q8IWA6 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CCDC60Q8IWA6 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
CCDC60Q8IWA6 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CCDC60Q8IWA6 AL031848.2-201ENST00000607670 837 ntBASIC26.72■■□□□ 1.87
CCDC60Q8IWA6 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC26.72■■□□□ 1.87
CCDC60Q8IWA6 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CCDC60Q8IWA6 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CCDC60Q8IWA6 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CCDC60Q8IWA6 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CCDC60Q8IWA6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.7■■□□□ 1.87
CCDC60Q8IWA6 AC096887.2-201ENST00000623443 1957 ntBASIC26.69■■□□□ 1.86
CCDC60Q8IWA6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.69■■□□□ 1.86
CCDC60Q8IWA6 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CCDC60Q8IWA6 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC26.69■■□□□ 1.86
CCDC60Q8IWA6 PRTG-204ENST00000561292 833 ntTSL 3 BASIC26.69■■□□□ 1.86
CCDC60Q8IWA6 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
CCDC60Q8IWA6 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.69■■□□□ 1.86
CCDC60Q8IWA6 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.69■■□□□ 1.86
CCDC60Q8IWA6 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CCDC60Q8IWA6 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CCDC60Q8IWA6 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC26.68■■□□□ 1.86
CCDC60Q8IWA6 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.68■■□□□ 1.86
CCDC60Q8IWA6 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CCDC60Q8IWA6 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26.67■■□□□ 1.86
CCDC60Q8IWA6 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.67■■□□□ 1.86
CCDC60Q8IWA6 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CCDC60Q8IWA6 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CCDC60Q8IWA6 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CCDC60Q8IWA6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC26.66■■□□□ 1.86
CCDC60Q8IWA6 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
CCDC60Q8IWA6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
CCDC60Q8IWA6 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CCDC60Q8IWA6 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC26.66■■□□□ 1.86
CCDC60Q8IWA6 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
CCDC60Q8IWA6 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC26.65■■□□□ 1.86
CCDC60Q8IWA6 AC022616.5-201ENST00000518796 181 ntBASIC26.65■■□□□ 1.86
CCDC60Q8IWA6 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.65■■□□□ 1.86
CCDC60Q8IWA6 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.65■■□□□ 1.86
CCDC60Q8IWA6 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CCDC60Q8IWA6 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
CCDC60Q8IWA6 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
CCDC60Q8IWA6 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.85
CCDC60Q8IWA6 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC26.64■■□□□ 1.85
CCDC60Q8IWA6 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.64■■□□□ 1.85
CCDC60Q8IWA6 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CCDC60Q8IWA6 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CCDC60Q8IWA6 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.63■■□□□ 1.85
CCDC60Q8IWA6 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CCDC60Q8IWA6 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CCDC60Q8IWA6 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CCDC60Q8IWA6 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC60Q8IWA6 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
CCDC60Q8IWA6 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.62■■□□□ 1.85
CCDC60Q8IWA6 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC60Q8IWA6 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC60Q8IWA6 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
CCDC60Q8IWA6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC60Q8IWA6 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
CCDC60Q8IWA6 AC092803.2-201ENST00000564287 1899 ntBASIC26.62■■□□□ 1.85
CCDC60Q8IWA6 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC26.62■■□□□ 1.85
CCDC60Q8IWA6 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC60Q8IWA6 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.61■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 290.8 ms