Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
VPS13BQ7Z7G8 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VPS13BQ7Z7G8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
VPS13BQ7Z7G8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC15□□□□□ -0.01
VPS13BQ7Z7G8 AC092028.1-203ENST00000608262 953 ntBASIC15□□□□□ -0.01
VPS13BQ7Z7G8 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
VPS13BQ7Z7G8 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
VPS13BQ7Z7G8 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VPS13BQ7Z7G8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VPS13BQ7Z7G8 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC14.99□□□□□ -0.01
VPS13BQ7Z7G8 GUK1-205ENST00000366722 850 ntTSL 3 BASIC14.99□□□□□ -0.01
VPS13BQ7Z7G8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC14.99□□□□□ -0.01
VPS13BQ7Z7G8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
VPS13BQ7Z7G8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS13BQ7Z7G8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS13BQ7Z7G8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC14.99□□□□□ -0.01
VPS13BQ7Z7G8 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS13BQ7Z7G8 AC021242.3-201ENST00000607598 1377 ntBASIC14.99□□□□□ -0.01
VPS13BQ7Z7G8 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS13BQ7Z7G8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC14.99□□□□□ -0.01
VPS13BQ7Z7G8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC14.99□□□□□ -0.01
VPS13BQ7Z7G8 AL031432.3-201ENST00000607698 485 ntBASIC14.99□□□□□ -0.01
VPS13BQ7Z7G8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VPS13BQ7Z7G8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VPS13BQ7Z7G8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
VPS13BQ7Z7G8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC14.98□□□□□ -0.01
VPS13BQ7Z7G8 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
VPS13BQ7Z7G8 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS13BQ7Z7G8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS13BQ7Z7G8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VPS13BQ7Z7G8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC14.97□□□□□ -0.01
VPS13BQ7Z7G8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
VPS13BQ7Z7G8 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS13BQ7Z7G8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC14.97□□□□□ -0.01
VPS13BQ7Z7G8 QDPR-206ENST00000508623 601 ntTSL 3 BASIC14.97□□□□□ -0.01
VPS13BQ7Z7G8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC14.97□□□□□ -0.01
VPS13BQ7Z7G8 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS13BQ7Z7G8 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS13BQ7Z7G8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VPS13BQ7Z7G8 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS13BQ7Z7G8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC14.96□□□□□ -0.01
VPS13BQ7Z7G8 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
VPS13BQ7Z7G8 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
VPS13BQ7Z7G8 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS13BQ7Z7G8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.02
VPS13BQ7Z7G8 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS13BQ7Z7G8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC14.95□□□□□ -0.02
VPS13BQ7Z7G8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC14.95□□□□□ -0.02
VPS13BQ7Z7G8 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS13BQ7Z7G8 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS13BQ7Z7G8 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VPS13BQ7Z7G8 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VPS13BQ7Z7G8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
VPS13BQ7Z7G8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS13BQ7Z7G8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
VPS13BQ7Z7G8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13BQ7Z7G8 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13BQ7Z7G8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13BQ7Z7G8 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
VPS13BQ7Z7G8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC14.94□□□□□ -0.02
VPS13BQ7Z7G8 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13BQ7Z7G8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13BQ7Z7G8 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13BQ7Z7G8 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13BQ7Z7G8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13BQ7Z7G8 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
VPS13BQ7Z7G8 MIR3621-201ENST00000580529 85 ntBASIC14.94□□□□□ -0.02
VPS13BQ7Z7G8 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS13BQ7Z7G8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS13BQ7Z7G8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS13BQ7Z7G8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS13BQ7Z7G8 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VPS13BQ7Z7G8 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS13BQ7Z7G8 KRT18P24-201ENST00000344739 1156 ntBASIC14.93□□□□□ -0.02
VPS13BQ7Z7G8 TSPY9P-201ENST00000440215 945 ntBASIC14.93□□□□□ -0.02
VPS13BQ7Z7G8 TSPY11P-201ENST00000442607 1045 ntBASIC14.93□□□□□ -0.02
VPS13BQ7Z7G8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
VPS13BQ7Z7G8 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC14.93□□□□□ -0.02
VPS13BQ7Z7G8 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS13BQ7Z7G8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS13BQ7Z7G8 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS13BQ7Z7G8 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS13BQ7Z7G8 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS13BQ7Z7G8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS13BQ7Z7G8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
VPS13BQ7Z7G8 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS13BQ7Z7G8 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS13BQ7Z7G8 LSM4-201ENST00000252816 986 ntTSL 2 BASIC14.91□□□□□ -0.02
VPS13BQ7Z7G8 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS13BQ7Z7G8 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS13BQ7Z7G8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC14.91□□□□□ -0.02
VPS13BQ7Z7G8 AC120024.1-201ENST00000562672 995 ntBASIC14.91□□□□□ -0.02
VPS13BQ7Z7G8 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS13BQ7Z7G8 MIR6724-1-201ENST00000616420 92 ntBASIC14.91□□□□□ -0.02
VPS13BQ7Z7G8 MIR6724-2-201ENST00000616483 92 ntBASIC14.91□□□□□ -0.02
VPS13BQ7Z7G8 MIR6724-4-201ENST00000617390 92 ntBASIC14.91□□□□□ -0.02
VPS13BQ7Z7G8 MIR6724-3-201ENST00000622482 92 ntBASIC14.91□□□□□ -0.02
VPS13BQ7Z7G8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS13BQ7Z7G8 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC14.91□□□□□ -0.02
VPS13BQ7Z7G8 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms