Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.35■□□□□ 0.69
C9orf139Q6ZV77 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C9orf139Q6ZV77 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
C9orf139Q6ZV77 AL356441.2-201ENST00000443009 864 ntBASIC19.35■□□□□ 0.69
C9orf139Q6ZV77 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.35■□□□□ 0.69
C9orf139Q6ZV77 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
C9orf139Q6ZV77 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
C9orf139Q6ZV77 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.35■□□□□ 0.69
C9orf139Q6ZV77 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.35■□□□□ 0.69
C9orf139Q6ZV77 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
C9orf139Q6ZV77 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.34■□□□□ 0.69
C9orf139Q6ZV77 BX664725.1-201ENST00000438252 379 ntBASIC19.34■□□□□ 0.69
C9orf139Q6ZV77 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
C9orf139Q6ZV77 THA1P-201ENST00000590384 1145 ntBASIC19.34■□□□□ 0.69
C9orf139Q6ZV77 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
C9orf139Q6ZV77 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.34■□□□□ 0.69
C9orf139Q6ZV77 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
C9orf139Q6ZV77 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
C9orf139Q6ZV77 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.33■□□□□ 0.69
C9orf139Q6ZV77 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
C9orf139Q6ZV77 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
C9orf139Q6ZV77 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.33■□□□□ 0.68
C9orf139Q6ZV77 KRT125P-201ENST00000546827 989 ntBASIC19.33■□□□□ 0.68
C9orf139Q6ZV77 AC131212.1-201ENST00000613771 668 ntBASIC19.33■□□□□ 0.68
C9orf139Q6ZV77 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
C9orf139Q6ZV77 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
C9orf139Q6ZV77 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.33■□□□□ 0.68
C9orf139Q6ZV77 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
C9orf139Q6ZV77 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
C9orf139Q6ZV77 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
C9orf139Q6ZV77 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
C9orf139Q6ZV77 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
C9orf139Q6ZV77 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
C9orf139Q6ZV77 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C9orf139Q6ZV77 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
C9orf139Q6ZV77 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
C9orf139Q6ZV77 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
C9orf139Q6ZV77 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
C9orf139Q6ZV77 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
C9orf139Q6ZV77 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
C9orf139Q6ZV77 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
C9orf139Q6ZV77 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
C9orf139Q6ZV77 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C9orf139Q6ZV77 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
C9orf139Q6ZV77 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.31■□□□□ 0.68
C9orf139Q6ZV77 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
C9orf139Q6ZV77 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C9orf139Q6ZV77 AL592295.1-201ENST00000400984 884 ntBASIC19.31■□□□□ 0.68
C9orf139Q6ZV77 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.31■□□□□ 0.68
C9orf139Q6ZV77 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.31■□□□□ 0.68
C9orf139Q6ZV77 AC137630.3-201ENST00000607245 391 ntBASIC19.31■□□□□ 0.68
C9orf139Q6ZV77 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C9orf139Q6ZV77 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C9orf139Q6ZV77 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C9orf139Q6ZV77 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
C9orf139Q6ZV77 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
C9orf139Q6ZV77 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.3■□□□□ 0.68
C9orf139Q6ZV77 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
C9orf139Q6ZV77 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.3■□□□□ 0.68
C9orf139Q6ZV77 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
C9orf139Q6ZV77 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
C9orf139Q6ZV77 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.3■□□□□ 0.68
C9orf139Q6ZV77 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.29■□□□□ 0.68
C9orf139Q6ZV77 AC120024.1-201ENST00000562672 995 ntBASIC19.29■□□□□ 0.68
C9orf139Q6ZV77 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
C9orf139Q6ZV77 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
C9orf139Q6ZV77 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
C9orf139Q6ZV77 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
C9orf139Q6ZV77 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.28■□□□□ 0.68
C9orf139Q6ZV77 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
C9orf139Q6ZV77 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.28■□□□□ 0.68
C9orf139Q6ZV77 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
C9orf139Q6ZV77 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
C9orf139Q6ZV77 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.28■□□□□ 0.68
C9orf139Q6ZV77 MIR4787-201ENST00000607364 84 ntBASIC19.28■□□□□ 0.68
C9orf139Q6ZV77 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.28■□□□□ 0.68
C9orf139Q6ZV77 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
C9orf139Q6ZV77 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
C9orf139Q6ZV77 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
C9orf139Q6ZV77 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.28■□□□□ 0.68
C9orf139Q6ZV77 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.28■□□□□ 0.68
C9orf139Q6ZV77 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
C9orf139Q6ZV77 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
C9orf139Q6ZV77 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
C9orf139Q6ZV77 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.27■□□□□ 0.68
C9orf139Q6ZV77 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.27■□□□□ 0.68
C9orf139Q6ZV77 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.27■□□□□ 0.68
C9orf139Q6ZV77 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.27■□□□□ 0.68
C9orf139Q6ZV77 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
C9orf139Q6ZV77 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
C9orf139Q6ZV77 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
C9orf139Q6ZV77 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
C9orf139Q6ZV77 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
C9orf139Q6ZV77 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
C9orf139Q6ZV77 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
C9orf139Q6ZV77 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
C9orf139Q6ZV77 AC021242.3-201ENST00000607598 1377 ntBASIC19.25■□□□□ 0.67
C9orf139Q6ZV77 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C9orf139Q6ZV77 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.25■□□□□ 0.67
C9orf139Q6ZV77 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms