Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PPP4R3CPQ6ZMV5 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC26.83■■□□□ 1.89
PPP4R3CPQ6ZMV5 AC129492.7-201ENST00000622992 756 ntBASIC26.83■■□□□ 1.89
PPP4R3CPQ6ZMV5 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.83■■□□□ 1.89
PPP4R3CPQ6ZMV5 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
PPP4R3CPQ6ZMV5 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PPP4R3CPQ6ZMV5 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
PPP4R3CPQ6ZMV5 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
PPP4R3CPQ6ZMV5 AC009712.1-201ENST00000564938 316 ntBASIC26.82■■□□□ 1.88
PPP4R3CPQ6ZMV5 AC007386.2-202ENST00000622718 1018 ntTSL 3 BASIC26.82■■□□□ 1.88
PPP4R3CPQ6ZMV5 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PPP4R3CPQ6ZMV5 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
PPP4R3CPQ6ZMV5 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
PPP4R3CPQ6ZMV5 AC004987.1-201ENST00000428627 508 ntBASIC26.81■■□□□ 1.88
PPP4R3CPQ6ZMV5 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC26.81■■□□□ 1.88
PPP4R3CPQ6ZMV5 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
PPP4R3CPQ6ZMV5 AL391001.1-201ENST00000602747 715 ntBASIC26.81■■□□□ 1.88
PPP4R3CPQ6ZMV5 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
PPP4R3CPQ6ZMV5 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC26.8■■□□□ 1.88
PPP4R3CPQ6ZMV5 ATP5G2P3-201ENST00000429083 425 ntBASIC26.8■■□□□ 1.88
PPP4R3CPQ6ZMV5 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC26.8■■□□□ 1.88
PPP4R3CPQ6ZMV5 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
PPP4R3CPQ6ZMV5 COA4-204ENST00000541455 1038 ntTSL 5 BASIC26.8■■□□□ 1.88
PPP4R3CPQ6ZMV5 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
PPP4R3CPQ6ZMV5 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.8■■□□□ 1.88
PPP4R3CPQ6ZMV5 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PPP4R3CPQ6ZMV5 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
PPP4R3CPQ6ZMV5 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.79■■□□□ 1.88
PPP4R3CPQ6ZMV5 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PPP4R3CPQ6ZMV5 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PPP4R3CPQ6ZMV5 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC26.79■■□□□ 1.88
PPP4R3CPQ6ZMV5 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
PPP4R3CPQ6ZMV5 TSPY13P-201ENST00000338964 914 ntBASIC26.78■■□□□ 1.88
PPP4R3CPQ6ZMV5 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
PPP4R3CPQ6ZMV5 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
PPP4R3CPQ6ZMV5 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26.78■■□□□ 1.88
PPP4R3CPQ6ZMV5 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
PPP4R3CPQ6ZMV5 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.77■■□□□ 1.88
PPP4R3CPQ6ZMV5 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PPP4R3CPQ6ZMV5 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC26.77■■□□□ 1.88
PPP4R3CPQ6ZMV5 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
PPP4R3CPQ6ZMV5 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
PPP4R3CPQ6ZMV5 AL033527.3-201ENST00000566366 1196 ntBASIC26.77■■□□□ 1.88
PPP4R3CPQ6ZMV5 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC26.77■■□□□ 1.88
PPP4R3CPQ6ZMV5 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC26.77■■□□□ 1.88
PPP4R3CPQ6ZMV5 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PPP4R3CPQ6ZMV5 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC26.76■■□□□ 1.87
PPP4R3CPQ6ZMV5 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
PPP4R3CPQ6ZMV5 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
PPP4R3CPQ6ZMV5 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
PPP4R3CPQ6ZMV5 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC26.75■■□□□ 1.87
PPP4R3CPQ6ZMV5 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC26.75■■□□□ 1.87
PPP4R3CPQ6ZMV5 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PPP4R3CPQ6ZMV5 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
PPP4R3CPQ6ZMV5 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PPP4R3CPQ6ZMV5 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
PPP4R3CPQ6ZMV5 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
PPP4R3CPQ6ZMV5 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC26.74■■□□□ 1.87
PPP4R3CPQ6ZMV5 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
PPP4R3CPQ6ZMV5 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
PPP4R3CPQ6ZMV5 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
PPP4R3CPQ6ZMV5 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
PPP4R3CPQ6ZMV5 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC26.73■■□□□ 1.87
PPP4R3CPQ6ZMV5 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC26.73■■□□□ 1.87
PPP4R3CPQ6ZMV5 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.73■■□□□ 1.87
PPP4R3CPQ6ZMV5 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.72■■□□□ 1.87
PPP4R3CPQ6ZMV5 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
PPP4R3CPQ6ZMV5 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PPP4R3CPQ6ZMV5 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
PPP4R3CPQ6ZMV5 AC010501.1-201ENST00000606270 1962 ntBASIC26.72■■□□□ 1.87
PPP4R3CPQ6ZMV5 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PPP4R3CPQ6ZMV5 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PPP4R3CPQ6ZMV5 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
PPP4R3CPQ6ZMV5 DUX4L9-201ENST00000449051 1259 ntBASIC26.72■■□□□ 1.87
PPP4R3CPQ6ZMV5 SPCS2P3-201ENST00000500401 656 ntBASIC26.72■■□□□ 1.87
PPP4R3CPQ6ZMV5 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC26.72■■□□□ 1.87
PPP4R3CPQ6ZMV5 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PPP4R3CPQ6ZMV5 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.72■■□□□ 1.87
PPP4R3CPQ6ZMV5 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.71■■□□□ 1.87
PPP4R3CPQ6ZMV5 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PPP4R3CPQ6ZMV5 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC26.71■■□□□ 1.87
PPP4R3CPQ6ZMV5 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
PPP4R3CPQ6ZMV5 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
PPP4R3CPQ6ZMV5 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
PPP4R3CPQ6ZMV5 AL133445.2-201ENST00000611191 527 ntBASIC26.71■■□□□ 1.87
PPP4R3CPQ6ZMV5 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PPP4R3CPQ6ZMV5 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC26.71■■□□□ 1.87
PPP4R3CPQ6ZMV5 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PPP4R3CPQ6ZMV5 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
PPP4R3CPQ6ZMV5 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
PPP4R3CPQ6ZMV5 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
PPP4R3CPQ6ZMV5 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC26.7■■□□□ 1.86
PPP4R3CPQ6ZMV5 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC26.7■■□□□ 1.86
PPP4R3CPQ6ZMV5 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
PPP4R3CPQ6ZMV5 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
PPP4R3CPQ6ZMV5 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.7■■□□□ 1.86
PPP4R3CPQ6ZMV5 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC26.69■■□□□ 1.86
PPP4R3CPQ6ZMV5 GUK1-208ENST00000366728 842 ntTSL 2 BASIC26.69■■□□□ 1.86
PPP4R3CPQ6ZMV5 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC26.69■■□□□ 1.86
PPP4R3CPQ6ZMV5 AC010740.1-201ENST00000417035 684 ntBASIC26.69■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms