Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 RARRES2P6-201ENST00000567333 442 ntBASIC16.39■□□□□ 0.21
VPS13DQ5THJ4 MIR3621-201ENST00000580529 85 ntBASIC16.39■□□□□ 0.21
VPS13DQ5THJ4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.39■□□□□ 0.21
VPS13DQ5THJ4 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
VPS13DQ5THJ4 DRD5P2-201ENST00000421395 2012 ntBASIC16.39■□□□□ 0.21
VPS13DQ5THJ4 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS13DQ5THJ4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS13DQ5THJ4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC16.39■□□□□ 0.21
VPS13DQ5THJ4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC16.39■□□□□ 0.21
VPS13DQ5THJ4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VPS13DQ5THJ4 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS13DQ5THJ4 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
VPS13DQ5THJ4 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS13DQ5THJ4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS13DQ5THJ4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VPS13DQ5THJ4 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS13DQ5THJ4 AF131216.4-201ENST00000638924 1588 ntBASIC16.38■□□□□ 0.21
VPS13DQ5THJ4 AC096631.2-201ENST00000436136 790 ntBASIC16.38■□□□□ 0.21
VPS13DQ5THJ4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VPS13DQ5THJ4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
VPS13DQ5THJ4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS13DQ5THJ4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC16.37■□□□□ 0.21
VPS13DQ5THJ4 ST7-205ENST00000393446 2114 ntTSL 5 BASIC16.37■□□□□ 0.21
VPS13DQ5THJ4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC16.37■□□□□ 0.21
VPS13DQ5THJ4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS13DQ5THJ4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS13DQ5THJ4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
VPS13DQ5THJ4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS13DQ5THJ4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS13DQ5THJ4 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC16.36■□□□□ 0.21
VPS13DQ5THJ4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC16.36■□□□□ 0.21
VPS13DQ5THJ4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC16.36■□□□□ 0.21
VPS13DQ5THJ4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.36■□□□□ 0.21
VPS13DQ5THJ4 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS13DQ5THJ4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS13DQ5THJ4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS13DQ5THJ4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
VPS13DQ5THJ4 AC005837.3-201ENST00000612163 286 ntBASIC16.36■□□□□ 0.21
VPS13DQ5THJ4 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS13DQ5THJ4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC16.36■□□□□ 0.21
VPS13DQ5THJ4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VPS13DQ5THJ4 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VPS13DQ5THJ4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VPS13DQ5THJ4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC16.36■□□□□ 0.21
VPS13DQ5THJ4 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS13DQ5THJ4 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS13DQ5THJ4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS13DQ5THJ4 AC139426.1-201ENST00000568218 2529 ntBASIC16.34■□□□□ 0.21
VPS13DQ5THJ4 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.34■□□□□ 0.21
VPS13DQ5THJ4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC16.34■□□□□ 0.21
VPS13DQ5THJ4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS13DQ5THJ4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS13DQ5THJ4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.34■□□□□ 0.21
VPS13DQ5THJ4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS13DQ5THJ4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VPS13DQ5THJ4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
VPS13DQ5THJ4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC16.34■□□□□ 0.21
VPS13DQ5THJ4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.33■□□□□ 0.21
VPS13DQ5THJ4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.33■□□□□ 0.21
VPS13DQ5THJ4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC16.33■□□□□ 0.21
VPS13DQ5THJ4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
VPS13DQ5THJ4 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS13DQ5THJ4 AL031432.3-201ENST00000607698 485 ntBASIC16.33■□□□□ 0.2
VPS13DQ5THJ4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC16.33■□□□□ 0.2
VPS13DQ5THJ4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
VPS13DQ5THJ4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
VPS13DQ5THJ4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
VPS13DQ5THJ4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC16.32■□□□□ 0.2
VPS13DQ5THJ4 AC011551.1-201ENST00000614101 683 ntBASIC16.32■□□□□ 0.2
VPS13DQ5THJ4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC16.32■□□□□ 0.2
VPS13DQ5THJ4 ZNRF2P3-201ENST00000424200 374 ntBASIC16.32■□□□□ 0.2
VPS13DQ5THJ4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC16.32■□□□□ 0.2
VPS13DQ5THJ4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS13DQ5THJ4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.32■□□□□ 0.2
VPS13DQ5THJ4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC16.32■□□□□ 0.2
VPS13DQ5THJ4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS13DQ5THJ4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
VPS13DQ5THJ4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS13DQ5THJ4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC16.31■□□□□ 0.2
VPS13DQ5THJ4 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.31■□□□□ 0.2
VPS13DQ5THJ4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC16.31■□□□□ 0.2
VPS13DQ5THJ4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VPS13DQ5THJ4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS13DQ5THJ4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS13DQ5THJ4 TSPY9P-201ENST00000440215 945 ntBASIC16.31■□□□□ 0.2
VPS13DQ5THJ4 TSPY11P-201ENST00000442607 1045 ntBASIC16.31■□□□□ 0.2
VPS13DQ5THJ4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS13DQ5THJ4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
VPS13DQ5THJ4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC16.31■□□□□ 0.2
VPS13DQ5THJ4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC16.31■□□□□ 0.2
VPS13DQ5THJ4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC16.31■□□□□ 0.2
VPS13DQ5THJ4 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS13DQ5THJ4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
VPS13DQ5THJ4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
VPS13DQ5THJ4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VPS13DQ5THJ4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS13DQ5THJ4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS13DQ5THJ4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VPS13DQ5THJ4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC16.29■□□□□ 0.2
VPS13DQ5THJ4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms