Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.68■■□□□ 1.7
CTC1Q2NKJ3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CTC1Q2NKJ3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CTC1Q2NKJ3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
CTC1Q2NKJ3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CTC1Q2NKJ3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.68■■□□□ 1.7
CTC1Q2NKJ3 AC137630.3-201ENST00000607245 391 ntBASIC25.68■■□□□ 1.7
CTC1Q2NKJ3 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CTC1Q2NKJ3 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
CTC1Q2NKJ3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.67■■□□□ 1.7
CTC1Q2NKJ3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.67■■□□□ 1.7
CTC1Q2NKJ3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC25.67■■□□□ 1.7
CTC1Q2NKJ3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC25.67■■□□□ 1.7
CTC1Q2NKJ3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CTC1Q2NKJ3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CTC1Q2NKJ3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.66■■□□□ 1.7
CTC1Q2NKJ3 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CTC1Q2NKJ3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CTC1Q2NKJ3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.66■■□□□ 1.7
CTC1Q2NKJ3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CTC1Q2NKJ3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CTC1Q2NKJ3 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CTC1Q2NKJ3 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.66■■□□□ 1.7
CTC1Q2NKJ3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.65■■□□□ 1.7
CTC1Q2NKJ3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC25.65■■□□□ 1.7
CTC1Q2NKJ3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CTC1Q2NKJ3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC25.65■■□□□ 1.7
CTC1Q2NKJ3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC25.65■■□□□ 1.7
CTC1Q2NKJ3 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
CTC1Q2NKJ3 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.64■■□□□ 1.7
CTC1Q2NKJ3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
CTC1Q2NKJ3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC25.64■■□□□ 1.7
CTC1Q2NKJ3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CTC1Q2NKJ3 AC021242.3-201ENST00000607598 1377 ntBASIC25.64■■□□□ 1.69
CTC1Q2NKJ3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CTC1Q2NKJ3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.64■■□□□ 1.69
CTC1Q2NKJ3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CTC1Q2NKJ3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CTC1Q2NKJ3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC25.63■■□□□ 1.69
CTC1Q2NKJ3 AC131281.2-201ENST00000520478 145 ntBASIC25.63■■□□□ 1.69
CTC1Q2NKJ3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CTC1Q2NKJ3 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CTC1Q2NKJ3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC25.63■■□□□ 1.69
CTC1Q2NKJ3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.62■■□□□ 1.69
CTC1Q2NKJ3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CTC1Q2NKJ3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.62■■□□□ 1.69
CTC1Q2NKJ3 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CTC1Q2NKJ3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CTC1Q2NKJ3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.61■■□□□ 1.69
CTC1Q2NKJ3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CTC1Q2NKJ3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.61■■□□□ 1.69
CTC1Q2NKJ3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CTC1Q2NKJ3 KRT18P10-201ENST00000388836 1287 ntBASIC25.6■■□□□ 1.69
CTC1Q2NKJ3 TSPY9P-201ENST00000440215 945 ntBASIC25.6■■□□□ 1.69
CTC1Q2NKJ3 TSPY11P-201ENST00000442607 1045 ntBASIC25.6■■□□□ 1.69
CTC1Q2NKJ3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.6■■□□□ 1.69
CTC1Q2NKJ3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.6■■□□□ 1.69
CTC1Q2NKJ3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.6■■□□□ 1.69
CTC1Q2NKJ3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CTC1Q2NKJ3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CTC1Q2NKJ3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CTC1Q2NKJ3 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
CTC1Q2NKJ3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CTC1Q2NKJ3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC25.59■■□□□ 1.69
CTC1Q2NKJ3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.59■■□□□ 1.69
CTC1Q2NKJ3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC25.59■■□□□ 1.69
CTC1Q2NKJ3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.59■■□□□ 1.69
CTC1Q2NKJ3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CTC1Q2NKJ3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.59■■□□□ 1.69
CTC1Q2NKJ3 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
CTC1Q2NKJ3 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CTC1Q2NKJ3 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CTC1Q2NKJ3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CTC1Q2NKJ3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.58■■□□□ 1.69
CTC1Q2NKJ3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.58■■□□□ 1.68
CTC1Q2NKJ3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CTC1Q2NKJ3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC25.57■■□□□ 1.68
CTC1Q2NKJ3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC25.57■■□□□ 1.68
CTC1Q2NKJ3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.57■■□□□ 1.68
CTC1Q2NKJ3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CTC1Q2NKJ3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
CTC1Q2NKJ3 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
CTC1Q2NKJ3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.56■■□□□ 1.68
CTC1Q2NKJ3 AC092028.1-203ENST00000608262 953 ntBASIC25.56■■□□□ 1.68
CTC1Q2NKJ3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
CTC1Q2NKJ3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
CTC1Q2NKJ3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC25.55■■□□□ 1.68
CTC1Q2NKJ3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC25.55■■□□□ 1.68
CTC1Q2NKJ3 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.55■■□□□ 1.68
CTC1Q2NKJ3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CTC1Q2NKJ3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CTC1Q2NKJ3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CTC1Q2NKJ3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.54■■□□□ 1.68
CTC1Q2NKJ3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.54■■□□□ 1.68
CTC1Q2NKJ3 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CTC1Q2NKJ3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC25.53■■□□□ 1.68
CTC1Q2NKJ3 AL136116.3-201ENST00000402907 1138 ntBASIC25.53■■□□□ 1.68
CTC1Q2NKJ3 AC110285.6-201ENST00000617652 491 ntBASIC25.53■■□□□ 1.68
CTC1Q2NKJ3 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CTC1Q2NKJ3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.53■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms