Protein–RNA interactions for Protein: P78345

RPP38, Ribonuclease P protein subunit p38, humanhuman

Known RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38P78345 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RPP38P78345 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.42■■□□□ 1.18
RPP38P78345 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
RPP38P78345 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.41■■□□□ 1.18
RPP38P78345 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.41■■□□□ 1.18
RPP38P78345 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
RPP38P78345 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.41■■□□□ 1.18
RPP38P78345 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RPP38P78345 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.41■■□□□ 1.18
RPP38P78345 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RPP38P78345 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RPP38P78345 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
RPP38P78345 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RPP38P78345 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
RPP38P78345 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RPP38P78345 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RPP38P78345 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RPP38P78345 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
RPP38P78345 AC133552.2-201ENST00000619106 1032 ntBASIC22.4■■□□□ 1.18
RPP38P78345 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RPP38P78345 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RPP38P78345 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
RPP38P78345 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.39■■□□□ 1.17
RPP38P78345 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RPP38P78345 AC026202.3-201ENST00000600805 1127 ntBASIC22.39■■□□□ 1.17
RPP38P78345 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RPP38P78345 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.17
RPP38P78345 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.39■■□□□ 1.17
RPP38P78345 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC22.39■■□□□ 1.17
RPP38P78345 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC22.39■■□□□ 1.17
RPP38P78345 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
RPP38P78345 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RPP38P78345 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RPP38P78345 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RPP38P78345 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RPP38P78345 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
RPP38P78345 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC22.38■■□□□ 1.17
RPP38P78345 U85056.1-201ENST00000616429 682 ntBASIC22.38■■□□□ 1.17
RPP38P78345 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RPP38P78345 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RPP38P78345 AC010501.1-201ENST00000606270 1962 ntBASIC22.38■■□□□ 1.17
RPP38P78345 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RPP38P78345 AC142381.3-201ENST00000568208 1670 ntBASIC22.37■■□□□ 1.17
RPP38P78345 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
RPP38P78345 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RPP38P78345 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
RPP38P78345 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RPP38P78345 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RPP38P78345 AC009831.1-201ENST00000580420 1582 ntBASIC22.37■■□□□ 1.17
RPP38P78345 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.36■■□□□ 1.17
RPP38P78345 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RPP38P78345 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RPP38P78345 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RPP38P78345 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.36■■□□□ 1.17
RPP38P78345 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RPP38P78345 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.36■■□□□ 1.17
RPP38P78345 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
RPP38P78345 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RPP38P78345 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.36■■□□□ 1.17
RPP38P78345 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
RPP38P78345 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RPP38P78345 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RPP38P78345 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RPP38P78345 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RPP38P78345 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
RPP38P78345 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RPP38P78345 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RPP38P78345 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RPP38P78345 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RPP38P78345 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RPP38P78345 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
RPP38P78345 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RPP38P78345 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RPP38P78345 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.34■■□□□ 1.17
RPP38P78345 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
RPP38P78345 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RPP38P78345 RAP2CP1-202ENST00000605179 643 ntBASIC22.34■■□□□ 1.17
RPP38P78345 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
RPP38P78345 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.33■■□□□ 1.17
RPP38P78345 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RPP38P78345 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.33■■□□□ 1.17
RPP38P78345 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RPP38P78345 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.33■■□□□ 1.16
RPP38P78345 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
RPP38P78345 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.33■■□□□ 1.16
RPP38P78345 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
RPP38P78345 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.32■■□□□ 1.16
RPP38P78345 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RPP38P78345 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RPP38P78345 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RPP38P78345 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RPP38P78345 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.32■■□□□ 1.16
RPP38P78345 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.31■■□□□ 1.16
RPP38P78345 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RPP38P78345 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
RPP38P78345 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RPP38P78345 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RPP38P78345 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RPP38P78345 AL592293.1-201ENST00000502889 1188 ntBASIC22.31■■□□□ 1.16
RPP38P78345 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms