Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC18.78■□□□□ 0.6
RAB5BP61020 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RAB5BP61020 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB5BP61020 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB5BP61020 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB5BP61020 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB5BP61020 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB5BP61020 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB5BP61020 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RAB5BP61020 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB5BP61020 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.77■□□□□ 0.6
RAB5BP61020 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB5BP61020 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.77■□□□□ 0.6
RAB5BP61020 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB5BP61020 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.77■□□□□ 0.6
RAB5BP61020 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB5BP61020 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.77■□□□□ 0.6
RAB5BP61020 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB5BP61020 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB5BP61020 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB5BP61020 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB5BP61020 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB5BP61020 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.76■□□□□ 0.59
RAB5BP61020 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB5BP61020 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB5BP61020 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB5BP61020 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB5BP61020 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB5BP61020 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB5BP61020 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB5BP61020 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB5BP61020 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB5BP61020 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RAB5BP61020 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB5BP61020 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.75■□□□□ 0.59
RAB5BP61020 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB5BP61020 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.74■□□□□ 0.59
RAB5BP61020 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RAB5BP61020 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RAB5BP61020 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB5BP61020 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.74■□□□□ 0.59
RAB5BP61020 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB5BP61020 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.74■□□□□ 0.59
RAB5BP61020 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB5BP61020 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RAB5BP61020 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
RAB5BP61020 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RAB5BP61020 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RAB5BP61020 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB5BP61020 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB5BP61020 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB5BP61020 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB5BP61020 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB5BP61020 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB5BP61020 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB5BP61020 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.73■□□□□ 0.59
RAB5BP61020 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB5BP61020 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB5BP61020 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB5BP61020 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RAB5BP61020 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB5BP61020 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RAB5BP61020 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.72■□□□□ 0.59
RAB5BP61020 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RAB5BP61020 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB5BP61020 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB5BP61020 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB5BP61020 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB5BP61020 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB5BP61020 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB5BP61020 RNF165-205ENST00000588679 2904 ntBASIC18.71■□□□□ 0.59
RAB5BP61020 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB5BP61020 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB5BP61020 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB5BP61020 LINC01124-201ENST00000409786 2117 ntBASIC18.71■□□□□ 0.59
RAB5BP61020 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB5BP61020 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB5BP61020 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB5BP61020 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB5BP61020 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB5BP61020 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB5BP61020 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB5BP61020 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB5BP61020 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB5BP61020 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB5BP61020 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB5BP61020 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RAB5BP61020 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.69■□□□□ 0.58
RAB5BP61020 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB5BP61020 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB5BP61020 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB5BP61020 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAB5BP61020 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB5BP61020 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RAB5BP61020 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB5BP61020 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB5BP61020 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB5BP61020 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB5BP61020 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB5BP61020 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms