Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HMGA2P52926 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HMGA2P52926 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
HMGA2P52926 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
HMGA2P52926 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HMGA2P52926 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.88■■□□□ 1.09
HMGA2P52926 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HMGA2P52926 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
HMGA2P52926 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.88■■□□□ 1.09
HMGA2P52926 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HMGA2P52926 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
HMGA2P52926 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HMGA2P52926 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HMGA2P52926 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HMGA2P52926 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HMGA2P52926 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.87■■□□□ 1.09
HMGA2P52926 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HMGA2P52926 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
HMGA2P52926 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HMGA2P52926 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.86■■□□□ 1.09
HMGA2P52926 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HMGA2P52926 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HMGA2P52926 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
HMGA2P52926 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HMGA2P52926 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.85■■□□□ 1.09
HMGA2P52926 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HMGA2P52926 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HMGA2P52926 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
HMGA2P52926 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HMGA2P52926 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.85■■□□□ 1.09
HMGA2P52926 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.84■■□□□ 1.09
HMGA2P52926 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HMGA2P52926 AC141586.4-201ENST00000624558 1573 ntBASIC21.84■■□□□ 1.09
HMGA2P52926 AC126177.7-201ENST00000547904 679 ntBASIC21.84■■□□□ 1.09
HMGA2P52926 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
HMGA2P52926 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HMGA2P52926 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HMGA2P52926 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.84■■□□□ 1.09
HMGA2P52926 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.83■■□□□ 1.09
HMGA2P52926 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HMGA2P52926 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HMGA2P52926 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HMGA2P52926 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HMGA2P52926 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.83■■□□□ 1.09
HMGA2P52926 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.83■■□□□ 1.08
HMGA2P52926 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
HMGA2P52926 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HMGA2P52926 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HMGA2P52926 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HMGA2P52926 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
HMGA2P52926 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
HMGA2P52926 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.82■■□□□ 1.08
HMGA2P52926 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HMGA2P52926 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HMGA2P52926 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HMGA2P52926 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.81■■□□□ 1.08
HMGA2P52926 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HMGA2P52926 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HMGA2P52926 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HMGA2P52926 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HMGA2P52926 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.8■■□□□ 1.08
HMGA2P52926 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
HMGA2P52926 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.8■■□□□ 1.08
HMGA2P52926 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.8■■□□□ 1.08
HMGA2P52926 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HMGA2P52926 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HMGA2P52926 RPS2P35-201ENST00000443417 897 ntBASIC21.8■■□□□ 1.08
HMGA2P52926 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
HMGA2P52926 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HMGA2P52926 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HMGA2P52926 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
HMGA2P52926 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.79■■□□□ 1.08
HMGA2P52926 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HMGA2P52926 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
HMGA2P52926 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HMGA2P52926 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
HMGA2P52926 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
HMGA2P52926 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HMGA2P52926 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HMGA2P52926 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HMGA2P52926 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
HMGA2P52926 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.78■■□□□ 1.08
HMGA2P52926 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HMGA2P52926 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.78■■□□□ 1.08
HMGA2P52926 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.78■■□□□ 1.08
HMGA2P52926 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HMGA2P52926 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.78■■□□□ 1.08
HMGA2P52926 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HMGA2P52926 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
HMGA2P52926 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
HMGA2P52926 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HMGA2P52926 ZNRF2P2-203ENST00000454624 420 ntBASIC21.77■■□□□ 1.08
HMGA2P52926 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.77■■□□□ 1.08
HMGA2P52926 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HMGA2P52926 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
HMGA2P52926 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
HMGA2P52926 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
HMGA2P52926 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.76■■□□□ 1.07
HMGA2P52926 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HMGA2P52926 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms