Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
GDNFP39905 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
GDNFP39905 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GDNFP39905 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.65■□□□□ 0.9
GDNFP39905 MIR7108-201ENST00000614319 87 ntBASIC20.65■□□□□ 0.9
GDNFP39905 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.65■□□□□ 0.9
GDNFP39905 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GDNFP39905 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GDNFP39905 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.64■□□□□ 0.9
GDNFP39905 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
GDNFP39905 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GDNFP39905 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.64■□□□□ 0.89
GDNFP39905 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
GDNFP39905 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
GDNFP39905 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.64■□□□□ 0.89
GDNFP39905 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.64■□□□□ 0.89
GDNFP39905 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GDNFP39905 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GDNFP39905 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GDNFP39905 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.63■□□□□ 0.89
GDNFP39905 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
GDNFP39905 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GDNFP39905 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
GDNFP39905 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.63■□□□□ 0.89
GDNFP39905 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GDNFP39905 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GDNFP39905 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GDNFP39905 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
GDNFP39905 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.62■□□□□ 0.89
GDNFP39905 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GDNFP39905 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
GDNFP39905 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
GDNFP39905 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
GDNFP39905 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.62■□□□□ 0.89
GDNFP39905 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.62■□□□□ 0.89
GDNFP39905 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
GDNFP39905 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
GDNFP39905 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
GDNFP39905 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.61■□□□□ 0.89
GDNFP39905 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GDNFP39905 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.61■□□□□ 0.89
GDNFP39905 AC096887.2-201ENST00000623443 1957 ntBASIC20.61■□□□□ 0.89
GDNFP39905 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.61■□□□□ 0.89
GDNFP39905 AC079834.2-201ENST00000609776 1949 ntBASIC20.61■□□□□ 0.89
GDNFP39905 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GDNFP39905 AC097639.1-201ENST00000565519 1891 ntBASIC20.6■□□□□ 0.89
GDNFP39905 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GDNFP39905 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
GDNFP39905 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
GDNFP39905 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GDNFP39905 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.6■□□□□ 0.89
GDNFP39905 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.6■□□□□ 0.89
GDNFP39905 MIR3648-2-201ENST00000581792 180 ntBASIC20.6■□□□□ 0.89
GDNFP39905 MIR3648-1-201ENST00000615959 180 ntBASIC20.6■□□□□ 0.89
GDNFP39905 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
GDNFP39905 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
GDNFP39905 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GDNFP39905 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
GDNFP39905 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.59■□□□□ 0.89
GDNFP39905 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
GDNFP39905 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.58■□□□□ 0.89
GDNFP39905 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GDNFP39905 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GDNFP39905 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
GDNFP39905 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GDNFP39905 HLA-V-202ENST00000446817 847 ntBASIC20.58■□□□□ 0.89
GDNFP39905 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
GDNFP39905 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.57■□□□□ 0.88
GDNFP39905 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
GDNFP39905 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GDNFP39905 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GDNFP39905 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
GDNFP39905 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.57■□□□□ 0.88
GDNFP39905 AC016575.1-201ENST00000607026 382 ntBASIC20.57■□□□□ 0.88
GDNFP39905 LINC00543-201ENST00000567234 1845 ntBASIC20.57■□□□□ 0.88
GDNFP39905 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GDNFP39905 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
GDNFP39905 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GDNFP39905 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GDNFP39905 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
GDNFP39905 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
GDNFP39905 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GDNFP39905 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
GDNFP39905 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GDNFP39905 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GDNFP39905 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
GDNFP39905 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.55■□□□□ 0.88
GDNFP39905 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDNFP39905 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDNFP39905 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GDNFP39905 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDNFP39905 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDNFP39905 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDNFP39905 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.54■□□□□ 0.88
GDNFP39905 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.54■□□□□ 0.88
GDNFP39905 AP003733.4-201ENST00000623785 1697 ntBASIC20.54■□□□□ 0.88
GDNFP39905 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GDNFP39905 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
GDNFP39905 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GDNFP39905 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms