Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.05■□□□□ 0.96
MSR1P21757 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MSR1P21757 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MSR1P21757 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MSR1P21757 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
MSR1P21757 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MSR1P21757 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
MSR1P21757 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MSR1P21757 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.04■□□□□ 0.96
MSR1P21757 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
MSR1P21757 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MSR1P21757 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
MSR1P21757 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.03■□□□□ 0.96
MSR1P21757 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MSR1P21757 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
MSR1P21757 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.03■□□□□ 0.96
MSR1P21757 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MSR1P21757 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.03■□□□□ 0.96
MSR1P21757 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MSR1P21757 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
MSR1P21757 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.02■□□□□ 0.96
MSR1P21757 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MSR1P21757 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MSR1P21757 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
MSR1P21757 AC009831.1-201ENST00000580420 1582 ntBASIC21.02■□□□□ 0.95
MSR1P21757 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
MSR1P21757 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MSR1P21757 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MSR1P21757 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
MSR1P21757 RARRES2P2-201ENST00000394842 485 ntBASIC21.01■□□□□ 0.95
MSR1P21757 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.01■□□□□ 0.95
MSR1P21757 AC133552.2-201ENST00000619106 1032 ntBASIC21.01■□□□□ 0.95
MSR1P21757 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MSR1P21757 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MSR1P21757 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MSR1P21757 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MSR1P21757 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21■□□□□ 0.95
MSR1P21757 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
MSR1P21757 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21■□□□□ 0.95
MSR1P21757 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
MSR1P21757 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MSR1P21757 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21■□□□□ 0.95
MSR1P21757 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.99■□□□□ 0.95
MSR1P21757 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
MSR1P21757 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.99■□□□□ 0.95
MSR1P21757 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.99■□□□□ 0.95
MSR1P21757 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MSR1P21757 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MSR1P21757 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
MSR1P21757 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
MSR1P21757 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MSR1P21757 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.98■□□□□ 0.95
MSR1P21757 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MSR1P21757 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
MSR1P21757 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MSR1P21757 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MSR1P21757 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
MSR1P21757 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MSR1P21757 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MSR1P21757 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.97■□□□□ 0.95
MSR1P21757 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
MSR1P21757 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
MSR1P21757 KRT18P10-201ENST00000388836 1287 ntBASIC20.97■□□□□ 0.95
MSR1P21757 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MSR1P21757 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MSR1P21757 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MSR1P21757 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MSR1P21757 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MSR1P21757 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.97■□□□□ 0.95
MSR1P21757 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.96■□□□□ 0.95
MSR1P21757 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MSR1P21757 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
MSR1P21757 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
MSR1P21757 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.96■□□□□ 0.95
MSR1P21757 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.96■□□□□ 0.95
MSR1P21757 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.96■□□□□ 0.95
MSR1P21757 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.95■□□□□ 0.95
MSR1P21757 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.95■□□□□ 0.94
MSR1P21757 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
MSR1P21757 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
MSR1P21757 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
MSR1P21757 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MSR1P21757 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MSR1P21757 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
MSR1P21757 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MSR1P21757 AC142381.3-201ENST00000568208 1670 ntBASIC20.94■□□□□ 0.94
MSR1P21757 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MSR1P21757 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.94■□□□□ 0.94
MSR1P21757 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.94■□□□□ 0.94
MSR1P21757 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MSR1P21757 AC022211.4-201ENST00000625094 2161 ntBASIC20.94■□□□□ 0.94
MSR1P21757 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MSR1P21757 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MSR1P21757 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.93■□□□□ 0.94
MSR1P21757 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MSR1P21757 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
MSR1P21757 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MSR1P21757 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MSR1P21757 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
MSR1P21757 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms