Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
MRPL3P09001 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MRPL3P09001 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MRPL3P09001 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MRPL3P09001 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MRPL3P09001 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
MRPL3P09001 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.3■■□□□ 1
MRPL3P09001 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.3■■□□□ 1
MRPL3P09001 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MRPL3P09001 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MRPL3P09001 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MRPL3P09001 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.3■■□□□ 1
MRPL3P09001 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.3■■□□□ 1
MRPL3P09001 CR559946.2-201ENST00000623684 991 ntBASIC21.3■■□□□ 1
MRPL3P09001 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MRPL3P09001 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
MRPL3P09001 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.29■■□□□ 1
MRPL3P09001 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MRPL3P09001 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.29■■□□□ 1
MRPL3P09001 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.29■■□□□ 1
MRPL3P09001 LINC01124-201ENST00000409786 2117 ntBASIC21.29■■□□□ 1
MRPL3P09001 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.29■■□□□ 1
MRPL3P09001 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MRPL3P09001 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MRPL3P09001 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.28■■□□□ 1
MRPL3P09001 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MRPL3P09001 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MRPL3P09001 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
MRPL3P09001 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
MRPL3P09001 AC097639.1-201ENST00000565519 1891 ntBASIC21.28■■□□□ 1
MRPL3P09001 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MRPL3P09001 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.28■■□□□ 1
MRPL3P09001 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.27■■□□□ 1
MRPL3P09001 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MRPL3P09001 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.27■■□□□ 1
MRPL3P09001 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.27■■□□□ 1
MRPL3P09001 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.27■■□□□ 1
MRPL3P09001 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MRPL3P09001 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
MRPL3P09001 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.27■■□□□ 1
MRPL3P09001 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.27■■□□□ 1
MRPL3P09001 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
MRPL3P09001 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.27■■□□□ 1
MRPL3P09001 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
MRPL3P09001 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.27■■□□□ 1
MRPL3P09001 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.27■■□□□ 1
MRPL3P09001 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.27■■□□□ 1
MRPL3P09001 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
MRPL3P09001 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MRPL3P09001 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
MRPL3P09001 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
MRPL3P09001 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.26■□□□□ 0.99
MRPL3P09001 AC126177.7-201ENST00000547904 679 ntBASIC21.26■□□□□ 0.99
MRPL3P09001 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.26■□□□□ 0.99
MRPL3P09001 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
MRPL3P09001 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MRPL3P09001 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.26■□□□□ 0.99
MRPL3P09001 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MRPL3P09001 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MRPL3P09001 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.25■□□□□ 0.99
MRPL3P09001 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
MRPL3P09001 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MRPL3P09001 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MRPL3P09001 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MRPL3P09001 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MRPL3P09001 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
MRPL3P09001 SLC6A10P-202ENST00000431994 2058 ntBASIC21.25■□□□□ 0.99
MRPL3P09001 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
MRPL3P09001 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.25■□□□□ 0.99
MRPL3P09001 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MRPL3P09001 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MRPL3P09001 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MRPL3P09001 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MRPL3P09001 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MRPL3P09001 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MRPL3P09001 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.24■□□□□ 0.99
MRPL3P09001 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.24■□□□□ 0.99
MRPL3P09001 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
MRPL3P09001 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MRPL3P09001 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.24■□□□□ 0.99
MRPL3P09001 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
MRPL3P09001 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MRPL3P09001 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
MRPL3P09001 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MRPL3P09001 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.23■□□□□ 0.99
MRPL3P09001 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MRPL3P09001 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MRPL3P09001 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
MRPL3P09001 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MRPL3P09001 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MRPL3P09001 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MRPL3P09001 AP003733.4-201ENST00000623785 1697 ntBASIC21.22■□□□□ 0.99
MRPL3P09001 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MRPL3P09001 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
MRPL3P09001 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MRPL3P09001 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
MRPL3P09001 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
MRPL3P09001 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MRPL3P09001 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MRPL3P09001 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms