Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 RPS2P35-201ENST00000443417 897 ntBASIC21.53■■□□□ 1.04
HMGN1P05114 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
HMGN1P05114 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
HMGN1P05114 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.53■■□□□ 1.04
HMGN1P05114 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.53■■□□□ 1.04
HMGN1P05114 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.52■■□□□ 1.04
HMGN1P05114 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGN1P05114 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGN1P05114 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGN1P05114 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HMGN1P05114 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGN1P05114 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.52■■□□□ 1.04
HMGN1P05114 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HMGN1P05114 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
HMGN1P05114 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
HMGN1P05114 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
HMGN1P05114 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HMGN1P05114 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HMGN1P05114 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.51■■□□□ 1.03
HMGN1P05114 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HMGN1P05114 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HMGN1P05114 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HMGN1P05114 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
HMGN1P05114 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.51■■□□□ 1.03
HMGN1P05114 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HMGN1P05114 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HMGN1P05114 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HMGN1P05114 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HMGN1P05114 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HMGN1P05114 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.5■■□□□ 1.03
HMGN1P05114 LINC01124-201ENST00000409786 2117 ntBASIC21.5■■□□□ 1.03
HMGN1P05114 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HMGN1P05114 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
HMGN1P05114 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
HMGN1P05114 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HMGN1P05114 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.49■■□□□ 1.03
HMGN1P05114 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
HMGN1P05114 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HMGN1P05114 SLC6A10P-202ENST00000431994 2058 ntBASIC21.49■■□□□ 1.03
HMGN1P05114 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.48■■□□□ 1.03
HMGN1P05114 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HMGN1P05114 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HMGN1P05114 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
HMGN1P05114 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.48■■□□□ 1.03
HMGN1P05114 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HMGN1P05114 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.48■■□□□ 1.03
HMGN1P05114 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HMGN1P05114 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HMGN1P05114 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HMGN1P05114 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HMGN1P05114 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
HMGN1P05114 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
HMGN1P05114 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HMGN1P05114 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HMGN1P05114 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HMGN1P05114 ZNRF2P2-203ENST00000454624 420 ntBASIC21.47■■□□□ 1.03
HMGN1P05114 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HMGN1P05114 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
HMGN1P05114 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HMGN1P05114 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HMGN1P05114 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
HMGN1P05114 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HMGN1P05114 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.46■■□□□ 1.03
HMGN1P05114 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.46■■□□□ 1.03
HMGN1P05114 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
HMGN1P05114 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
HMGN1P05114 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HMGN1P05114 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HMGN1P05114 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
HMGN1P05114 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HMGN1P05114 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
HMGN1P05114 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.45■■□□□ 1.02
HMGN1P05114 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
HMGN1P05114 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.45■■□□□ 1.02
HMGN1P05114 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HMGN1P05114 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HMGN1P05114 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.44■■□□□ 1.02
HMGN1P05114 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HMGN1P05114 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HMGN1P05114 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HMGN1P05114 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HMGN1P05114 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
HMGN1P05114 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
HMGN1P05114 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HMGN1P05114 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HMGN1P05114 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
HMGN1P05114 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HMGN1P05114 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
HMGN1P05114 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
HMGN1P05114 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HMGN1P05114 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HMGN1P05114 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HMGN1P05114 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
HMGN1P05114 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HMGN1P05114 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HMGN1P05114 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.42■■□□□ 1.02
HMGN1P05114 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
HMGN1P05114 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.42■■□□□ 1.02
HMGN1P05114 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HMGN1P05114 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms