Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
HMGCRP04035 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC27.33■■□□□ 1.97
HMGCRP04035 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
HMGCRP04035 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
HMGCRP04035 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
HMGCRP04035 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC27.32■■□□□ 1.96
HMGCRP04035 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC27.32■■□□□ 1.96
HMGCRP04035 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
HMGCRP04035 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
HMGCRP04035 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
HMGCRP04035 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC27.31■■□□□ 1.96
HMGCRP04035 MIR3621-201ENST00000580529 85 ntBASIC27.3■■□□□ 1.96
HMGCRP04035 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC27.3■■□□□ 1.96
HMGCRP04035 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
HMGCRP04035 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC27.3■■□□□ 1.96
HMGCRP04035 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
HMGCRP04035 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC27.29■■□□□ 1.96
HMGCRP04035 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC27.29■■□□□ 1.96
HMGCRP04035 AC005837.3-201ENST00000612163 286 ntBASIC27.29■■□□□ 1.96
HMGCRP04035 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
HMGCRP04035 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC27.29■■□□□ 1.96
HMGCRP04035 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
HMGCRP04035 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
HMGCRP04035 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
HMGCRP04035 PROC-203ENST00000409048 1586 ntTSL 5 BASIC27.28■■□□□ 1.96
HMGCRP04035 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
HMGCRP04035 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
HMGCRP04035 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
HMGCRP04035 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC27.28■■□□□ 1.96
HMGCRP04035 MIR4281-201ENST00000580852 62 ntBASIC27.28■■□□□ 1.96
HMGCRP04035 AC010997.5-201ENST00000609182 354 ntBASIC27.28■■□□□ 1.96
HMGCRP04035 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
HMGCRP04035 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
HMGCRP04035 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
HMGCRP04035 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC27.27■■□□□ 1.96
HMGCRP04035 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
HMGCRP04035 MIR6724-1-201ENST00000616420 92 ntBASIC27.26■■□□□ 1.95
HMGCRP04035 MIR6724-2-201ENST00000616483 92 ntBASIC27.26■■□□□ 1.95
HMGCRP04035 MIR6724-4-201ENST00000617390 92 ntBASIC27.26■■□□□ 1.95
HMGCRP04035 MIR6724-3-201ENST00000622482 92 ntBASIC27.26■■□□□ 1.95
HMGCRP04035 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
HMGCRP04035 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
HMGCRP04035 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC27.25■■□□□ 1.95
HMGCRP04035 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC27.25■■□□□ 1.95
HMGCRP04035 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
HMGCRP04035 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
HMGCRP04035 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC27.25■■□□□ 1.95
HMGCRP04035 AC096631.2-201ENST00000436136 790 ntBASIC27.25■■□□□ 1.95
HMGCRP04035 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
HMGCRP04035 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC27.24■■□□□ 1.95
HMGCRP04035 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
HMGCRP04035 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC27.23■■□□□ 1.95
HMGCRP04035 MTDHP2-201ENST00000601468 714 ntBASIC27.23■■□□□ 1.95
HMGCRP04035 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
HMGCRP04035 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
HMGCRP04035 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC27.23■■□□□ 1.95
HMGCRP04035 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
HMGCRP04035 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
HMGCRP04035 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC27.22■■□□□ 1.95
HMGCRP04035 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
HMGCRP04035 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
HMGCRP04035 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
HMGCRP04035 AL356740.2-201ENST00000601559 647 ntBASIC27.22■■□□□ 1.95
HMGCRP04035 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
HMGCRP04035 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
HMGCRP04035 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
HMGCRP04035 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC27.22■■□□□ 1.95
HMGCRP04035 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
HMGCRP04035 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
HMGCRP04035 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC27.21■■□□□ 1.95
HMGCRP04035 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC27.21■■□□□ 1.95
HMGCRP04035 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC27.21■■□□□ 1.95
HMGCRP04035 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC27.21■■□□□ 1.95
HMGCRP04035 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC27.21■■□□□ 1.95
HMGCRP04035 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC27.21■■□□□ 1.95
HMGCRP04035 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
HMGCRP04035 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
HMGCRP04035 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC27.2■■□□□ 1.94
HMGCRP04035 AC133561.4-201ENST00000566112 224 ntBASIC27.2■■□□□ 1.94
HMGCRP04035 AL449106.1-201ENST00000608517 1980 ntBASIC27.2■■□□□ 1.94
HMGCRP04035 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
HMGCRP04035 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
HMGCRP04035 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
HMGCRP04035 LSM4-201ENST00000252816 986 ntTSL 2 BASIC27.19■■□□□ 1.94
HMGCRP04035 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC27.19■■□□□ 1.94
HMGCRP04035 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC27.19■■□□□ 1.94
HMGCRP04035 MIR4466-201ENST00000606121 54 ntBASIC27.19■■□□□ 1.94
HMGCRP04035 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
HMGCRP04035 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
HMGCRP04035 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
HMGCRP04035 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
HMGCRP04035 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
HMGCRP04035 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC27.18■■□□□ 1.94
HMGCRP04035 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC27.17■■□□□ 1.94
HMGCRP04035 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC27.17■■□□□ 1.94
HMGCRP04035 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
HMGCRP04035 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
HMGCRP04035 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
HMGCRP04035 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
HMGCRP04035 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms