Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.35■■□□□ 1.81
CHRNA1P02708 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHRNA1P02708 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
CHRNA1P02708 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
CHRNA1P02708 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHRNA1P02708 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC26.34■■□□□ 1.81
CHRNA1P02708 AC142086.6-201ENST00000621154 1765 ntBASIC26.34■■□□□ 1.81
CHRNA1P02708 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHRNA1P02708 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CHRNA1P02708 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.34■■□□□ 1.81
CHRNA1P02708 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.34■■□□□ 1.81
CHRNA1P02708 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHRNA1P02708 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.34■■□□□ 1.81
CHRNA1P02708 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHRNA1P02708 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.34■■□□□ 1.81
CHRNA1P02708 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHRNA1P02708 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CHRNA1P02708 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CHRNA1P02708 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
CHRNA1P02708 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.33■■□□□ 1.81
CHRNA1P02708 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC26.33■■□□□ 1.81
CHRNA1P02708 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
CHRNA1P02708 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
CHRNA1P02708 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
CHRNA1P02708 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CHRNA1P02708 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.32■■□□□ 1.8
CHRNA1P02708 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
CHRNA1P02708 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC26.32■■□□□ 1.8
CHRNA1P02708 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CHRNA1P02708 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CHRNA1P02708 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
CHRNA1P02708 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHRNA1P02708 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHRNA1P02708 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHRNA1P02708 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC26.31■■□□□ 1.8
CHRNA1P02708 UNC93B8-201ENST00000511903 705 ntBASIC26.31■■□□□ 1.8
CHRNA1P02708 AC137630.3-201ENST00000607245 391 ntBASIC26.31■■□□□ 1.8
CHRNA1P02708 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CHRNA1P02708 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHRNA1P02708 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.3■■□□□ 1.8
CHRNA1P02708 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHRNA1P02708 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.3■■□□□ 1.8
CHRNA1P02708 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CHRNA1P02708 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC26.29■■□□□ 1.8
CHRNA1P02708 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC26.29■■□□□ 1.8
CHRNA1P02708 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CHRNA1P02708 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CHRNA1P02708 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CHRNA1P02708 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CHRNA1P02708 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHRNA1P02708 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHRNA1P02708 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.28■■□□□ 1.8
CHRNA1P02708 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.28■■□□□ 1.8
CHRNA1P02708 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CHRNA1P02708 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.28■■□□□ 1.8
CHRNA1P02708 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CHRNA1P02708 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHRNA1P02708 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26.27■■□□□ 1.8
CHRNA1P02708 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.27■■□□□ 1.8
CHRNA1P02708 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHRNA1P02708 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CHRNA1P02708 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHRNA1P02708 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.26■■□□□ 1.79
CHRNA1P02708 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.26■■□□□ 1.79
CHRNA1P02708 AC021242.3-201ENST00000607598 1377 ntBASIC26.26■■□□□ 1.79
CHRNA1P02708 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHRNA1P02708 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.26■■□□□ 1.79
CHRNA1P02708 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
CHRNA1P02708 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.25■■□□□ 1.79
CHRNA1P02708 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CHRNA1P02708 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CHRNA1P02708 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.24■■□□□ 1.79
CHRNA1P02708 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.23■■□□□ 1.79
CHRNA1P02708 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.23■■□□□ 1.79
CHRNA1P02708 AC019069.1-201ENST00000610008 1333 ntBASIC26.23■■□□□ 1.79
CHRNA1P02708 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC26.23■■□□□ 1.79
CHRNA1P02708 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC26.23■■□□□ 1.79
CHRNA1P02708 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CHRNA1P02708 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHRNA1P02708 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.22■■□□□ 1.79
CHRNA1P02708 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC26.22■■□□□ 1.79
CHRNA1P02708 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CHRNA1P02708 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
CHRNA1P02708 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CHRNA1P02708 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CHRNA1P02708 KRT16P3-201ENST00000439127 1283 ntBASIC26.21■■□□□ 1.79
CHRNA1P02708 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.21■■□□□ 1.79
CHRNA1P02708 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CHRNA1P02708 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CHRNA1P02708 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC26.2■■□□□ 1.78
CHRNA1P02708 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.2■■□□□ 1.78
CHRNA1P02708 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.2■■□□□ 1.78
CHRNA1P02708 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
CHRNA1P02708 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
CHRNA1P02708 TSPY9P-201ENST00000440215 945 ntBASIC26.19■■□□□ 1.78
CHRNA1P02708 TSPY11P-201ENST00000442607 1045 ntBASIC26.19■■□□□ 1.78
CHRNA1P02708 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC26.19■■□□□ 1.78
CHRNA1P02708 MIR4281-201ENST00000580852 62 ntBASIC26.19■■□□□ 1.78
CHRNA1P02708 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CHRNA1P02708 AC008406.3-201ENST00000620001 1374 ntBASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms