Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CDRT1O95170 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.17■□□□□ 0.98
CDRT1O95170 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDRT1O95170 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.16■□□□□ 0.98
CDRT1O95170 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.16■□□□□ 0.98
CDRT1O95170 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDRT1O95170 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.16■□□□□ 0.98
CDRT1O95170 AP003733.4-201ENST00000623785 1697 ntBASIC21.16■□□□□ 0.98
CDRT1O95170 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDRT1O95170 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CDRT1O95170 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDRT1O95170 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.16■□□□□ 0.98
CDRT1O95170 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDRT1O95170 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDRT1O95170 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CDRT1O95170 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDRT1O95170 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDRT1O95170 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.15■□□□□ 0.98
CDRT1O95170 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDRT1O95170 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDRT1O95170 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDRT1O95170 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.15■□□□□ 0.98
CDRT1O95170 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CDRT1O95170 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CDRT1O95170 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.14■□□□□ 0.98
CDRT1O95170 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDRT1O95170 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.14■□□□□ 0.97
CDRT1O95170 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDRT1O95170 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDRT1O95170 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDRT1O95170 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.13■□□□□ 0.97
CDRT1O95170 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDRT1O95170 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDRT1O95170 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDRT1O95170 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.13■□□□□ 0.97
CDRT1O95170 LINC00543-201ENST00000567234 1845 ntBASIC21.13■□□□□ 0.97
CDRT1O95170 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDRT1O95170 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.12■□□□□ 0.97
CDRT1O95170 DUX4L29-201ENST00000425409 679 ntBASIC21.12■□□□□ 0.97
CDRT1O95170 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.12■□□□□ 0.97
CDRT1O95170 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDRT1O95170 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.12■□□□□ 0.97
CDRT1O95170 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDRT1O95170 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.12■□□□□ 0.97
CDRT1O95170 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CDRT1O95170 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
CDRT1O95170 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDRT1O95170 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDRT1O95170 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDRT1O95170 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDRT1O95170 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.1■□□□□ 0.97
CDRT1O95170 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDRT1O95170 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.1■□□□□ 0.97
CDRT1O95170 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDRT1O95170 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDRT1O95170 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDRT1O95170 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDRT1O95170 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDRT1O95170 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDRT1O95170 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDRT1O95170 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDRT1O95170 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDRT1O95170 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDRT1O95170 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CDRT1O95170 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDRT1O95170 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDRT1O95170 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.08■□□□□ 0.97
CDRT1O95170 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.08■□□□□ 0.97
CDRT1O95170 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.08■□□□□ 0.97
CDRT1O95170 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CDRT1O95170 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.08■□□□□ 0.96
CDRT1O95170 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDRT1O95170 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDRT1O95170 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CDRT1O95170 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDRT1O95170 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CDRT1O95170 DUSP8P5-201ENST00000422884 1815 ntBASIC21.07■□□□□ 0.96
CDRT1O95170 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.07■□□□□ 0.96
CDRT1O95170 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDRT1O95170 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDRT1O95170 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDRT1O95170 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.07■□□□□ 0.96
CDRT1O95170 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDRT1O95170 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CDRT1O95170 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDRT1O95170 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDRT1O95170 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDRT1O95170 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CDRT1O95170 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CDRT1O95170 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDRT1O95170 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDRT1O95170 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDRT1O95170 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDRT1O95170 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDRT1O95170 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDRT1O95170 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
CDRT1O95170 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDRT1O95170 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
CDRT1O95170 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDRT1O95170 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms