Protein–RNA interactions for Protein: O75954

TSPAN9, Tetraspanin-9, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9O75954 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.23■□□□□ 0.83
TSPAN9O75954 AC022413.1-201ENST00000624602 984 ntBASIC20.23■□□□□ 0.83
TSPAN9O75954 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TSPAN9O75954 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TSPAN9O75954 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TSPAN9O75954 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TSPAN9O75954 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TSPAN9O75954 AL121603.2-201ENST00000557373 2117 ntBASIC20.22■□□□□ 0.83
TSPAN9O75954 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TSPAN9O75954 AC148477.6-201ENST00000623746 465 ntBASIC20.22■□□□□ 0.83
TSPAN9O75954 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TSPAN9O75954 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TSPAN9O75954 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TSPAN9O75954 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TSPAN9O75954 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.21■□□□□ 0.83
TSPAN9O75954 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TSPAN9O75954 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
TSPAN9O75954 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TSPAN9O75954 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TSPAN9O75954 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TSPAN9O75954 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TSPAN9O75954 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
TSPAN9O75954 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TSPAN9O75954 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.2■□□□□ 0.82
TSPAN9O75954 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TSPAN9O75954 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TSPAN9O75954 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TSPAN9O75954 SLC25A24-204ENST00000569674 2357 ntBASIC20.2■□□□□ 0.82
TSPAN9O75954 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TSPAN9O75954 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
TSPAN9O75954 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.19■□□□□ 0.82
TSPAN9O75954 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.19■□□□□ 0.82
TSPAN9O75954 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TSPAN9O75954 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
TSPAN9O75954 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.19■□□□□ 0.82
TSPAN9O75954 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TSPAN9O75954 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TSPAN9O75954 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
TSPAN9O75954 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TSPAN9O75954 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TSPAN9O75954 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TSPAN9O75954 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.18■□□□□ 0.82
TSPAN9O75954 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TSPAN9O75954 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TSPAN9O75954 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.18■□□□□ 0.82
TSPAN9O75954 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TSPAN9O75954 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TSPAN9O75954 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.18■□□□□ 0.82
TSPAN9O75954 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
TSPAN9O75954 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TSPAN9O75954 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TSPAN9O75954 BX255925.1-201ENST00000566954 1854 ntBASIC20.18■□□□□ 0.82
TSPAN9O75954 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TSPAN9O75954 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TSPAN9O75954 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.17■□□□□ 0.82
TSPAN9O75954 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.17■□□□□ 0.82
TSPAN9O75954 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TSPAN9O75954 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
TSPAN9O75954 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.17■□□□□ 0.82
TSPAN9O75954 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.17■□□□□ 0.82
TSPAN9O75954 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TSPAN9O75954 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
TSPAN9O75954 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TSPAN9O75954 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TSPAN9O75954 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TSPAN9O75954 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TSPAN9O75954 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TSPAN9O75954 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TSPAN9O75954 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.16■□□□□ 0.82
TSPAN9O75954 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TSPAN9O75954 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TSPAN9O75954 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TSPAN9O75954 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TSPAN9O75954 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TSPAN9O75954 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TSPAN9O75954 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TSPAN9O75954 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
TSPAN9O75954 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.15■□□□□ 0.82
TSPAN9O75954 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.15■□□□□ 0.82
TSPAN9O75954 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TSPAN9O75954 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TSPAN9O75954 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
TSPAN9O75954 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TSPAN9O75954 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
TSPAN9O75954 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TSPAN9O75954 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.14■□□□□ 0.81
TSPAN9O75954 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
TSPAN9O75954 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TSPAN9O75954 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.14■□□□□ 0.81
TSPAN9O75954 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
TSPAN9O75954 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.14■□□□□ 0.81
TSPAN9O75954 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TSPAN9O75954 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TSPAN9O75954 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.14■□□□□ 0.81
TSPAN9O75954 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.14■□□□□ 0.81
TSPAN9O75954 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TSPAN9O75954 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TSPAN9O75954 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TSPAN9O75954 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
TSPAN9O75954 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms